RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 BCAP29Q9UHQ4 241 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 KIAA1024Q9UPX6 916 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 RRP15Q9Y3B9 282 aaKnown RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 RABGAP1Q9Y3P9 1069 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 COBLO75128 1261 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 GCFC2P16383 781 aaKnown RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 HADHQ16836 314 aaKnown RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 NR5A1Q13285 461 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 AOC3Q16853 763 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 GPATCH4Q5T3I0 446 aaKnown RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 PAGE5Q96GU1 130 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 LMTK3Q96Q04 1460 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 HEXIM1O94992 359 aaKnown RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 PDE6BP35913 854 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 SF3A3Q12874 501 aaKnown RBP eCLIP18.28■□□□□ 0.525e-8■■■■□ 25.8
TSC2-204ENST00000401874 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
TSC2-204ENST00000401874 RESP18Q5W5W9 173 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 EFCAB13Q8IY85 973 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 TRPC6Q9Y210 931 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 MAP3K4Q9Y6R4 1608 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 HIP1RO75146 1068 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 GAP43P17677 238 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 TBC1D31Q96DN5 1066 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 BPIFA3Q9BQP9 254 aa18.28■□□□□ 0.52
TSC2-204ENST00000401874 AFPP02771 609 aaKnown RBP18.27■□□□□ 0.52
TSC2-204ENST00000401874 CCNE1P24864 410 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 CERKLQ49MI3 558 aaPredicted RBP18.27■□□□□ 0.52
TSC2-204ENST00000401874 PLA2G4DQ86XP0 818 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 NDUFA10O95299 355 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 FKBP3Q00688 224 aaKnown RBP18.27■□□□□ 0.52
TSC2-204ENST00000401874 MYL7Q01449 175 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 DLGAP5Q15398 846 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 CASC4Q6P4E1 433 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.52
TSC2-204ENST00000401874 NR2F2P24468 414 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 SEPT6Q14141 434 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 PTPROQ16827 1216 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 ARMCX5Q6P1M9 558 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 PNMA2Q9UL42 364 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 RIPOR2Q9Y4F9 1068 aa18.27■□□□□ 0.52
TSC2-204ENST00000401874 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 IFNB1P01574 187 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 LIG4P49917 911 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 GNPTABQ3T906 1256 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 C10orf76Q5T2E6 689 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 SLFN13Q68D06 897 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 LCORLQ8N3X6 602 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 RILPQ96NA2 401 aa18.27■□□□□ 0.51
TSC2-204ENST00000401874 ICA1Q05084 483 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 SEPT2Q15019 361 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 NHEJ1Q9H9Q4 299 aaPredicted RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 EPB41L5Q9HCM4 733 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 NT5C2P49902 561 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 SARNPP82979 210 aaKnown RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 KCTD16Q68DU8 428 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 CTAGE3PQ8IX95 158 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PDLIM2Q96JY6 352 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PCDHB6Q9Y5E3 794 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PCDHA1Q9Y5I3 950 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PGRMC1O00264 195 aaKnown RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 FAM98CQ17RN3 349 aaKnown RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 FBXO38Q6PIJ6 1188 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 MCF2L2Q86YR7 1114 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 PBKQ96KB5 322 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 CASQ2O14958 399 aaPredicted RBP18.26■□□□□ 0.51
TSC2-204ENST00000401874 STAM2O75886 525 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PSMD2Q13200 908 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 SNCBQ16143 134 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PTPN21Q16825 1174 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 XKR9Q5GH70 373 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 PPM1KQ8N3J5 372 aa18.26■□□□□ 0.51
TSC2-204ENST00000401874 ANKARQ7Z5J8 1434 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 PSMC2P35998 433 aaKnown RBP18.25■□□□□ 0.51
TSC2-204ENST00000401874 IRX4P78413 519 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 CCDC197Q8NCU1 140 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 CCDC17Q96LX7 622 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 RASGRP4Q8TDF6 673 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 GJA10Q969M2 543 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 LAMC1P11047 1609 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 MFAP3LO75121 409 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 MFAP3P55082 362 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 C2orf54Q08AI8 447 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 CARD10Q9BWT7 1032 aa18.25■□□□□ 0.51
TSC2-204ENST00000401874 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms