RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ARAP3Q8WWN8 1544 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 MAGEA1P43355 309 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 PSMD2Q13200 908 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 KAZNQ674X7 775 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 NEO1Q92859 1461 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 ERBB4Q15303 1308 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 CHL1O00533 1208 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 PCP11498 1178 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 SLC16A2P36021 539 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 OSTNP61366 133 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 NEDD9Q14511 834 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 IQCB1Q15051 598 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 P3H4Q92791 437 aa13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
CACNA1C-213ENST00000399629 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 IFNB1P01574 187 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 KCNJ6P48051 423 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 FBXW4P57775 412 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 NLRP12P59046 1061 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 BFSP1Q12934 665 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 SYT10Q6XYQ8 523 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 EFCAB13Q8IY85 973 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 MMP19Q99542 508 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 TFAMQ00059 246 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 WRNIP1Q96S55 665 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 FAM207AQ9NSI2 230 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 HPDP32754 393 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 RECQLP46063 649 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 MAP7D3Q8IWC1 876 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 USP26Q9BXU7 913 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 MFAP3P55082 362 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 RILPQ96NA2 401 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 MED7O43513 233 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 SYNDIG1Q9H7V2 258 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
CACNA1C-213ENST00000399629 ZNF202O95125 648 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PLCB1Q9NQ66 1216 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 FAM114A2Q9NRY5 505 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 FEZ2Q9UHY8 353 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ADALQ6DHV7 355 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PNMA8AQ86V59 439 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ATP6V1E2Q96A05 226 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 RSPH14Q9UHP6 348 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PPFIBP2Q8ND30 876 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 RBM46Q8TBY0 533 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 KDM5CP41229 1560 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ECE2O60344 883 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PTK2Q05397 1052 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PHKA1P46020 1223 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 FANCBQ8NB91 859 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 SNX21Q969T3 373 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
CACNA1C-213ENST00000399629 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 DYNLL1P63167 89 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 CDR2Q01850 454 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 MTRQ99707 1265 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 VPS18Q9P253 973 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
CACNA1C-213ENST00000399629 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms