RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 STAG1Q8WVM7 1258 aa21.5■■□□□ 1.03
UFD1-202ENST00000399523 ZNF287Q9HBT7 754 aa21.5■■□□□ 1.03
UFD1-202ENST00000399523 LCTP09848 1927 aa21.5■■□□□ 1.03
UFD1-202ENST00000399523 COL4A4P53420 1690 aaPredicted RBP21.5■■□□□ 1.03
UFD1-202ENST00000399523 PTPRSQ13332 1948 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 TRIP12Q14669 1992 aaPredicted RBP21.49■■□□□ 1.03
UFD1-202ENST00000399523 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.49■■□□□ 1.03
UFD1-202ENST00000399523 PLA2G6O60733 806 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 ALAS1P13196 640 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 CPT1AP50416 773 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 NFRKBQ6P4R8 1299 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 FAM178BQ8IXR5 827 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 RETREG2Q8NC44 543 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 GMCL1Q96IK5 515 aa21.49■■□□□ 1.03
UFD1-202ENST00000399523 MTG1Q9BT17 334 aaPredicted RBP21.49■■□□□ 1.03
UFD1-202ENST00000399523 FTOQ9C0B1 505 aaKnown RBP eCLIP21.49■■□□□ 1.03
UFD1-202ENST00000399523 WDFY4Q6ZS81 3184 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 RAB11FIP3O75154 756 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 NBPF20Q3BBV1 942 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 GJD3Q8N144 294 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 WDR11Q9BZH6 1224 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 PLIN4Q96Q06 1357 aa21.48■■□□□ 1.03
UFD1-202ENST00000399523 RBM47A0AV96 593 aaKnown RBP21.47■■□□□ 1.03
UFD1-202ENST00000399523 LCHNA4D1U4 455 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 PRDM1O75626 825 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 MYL3P08590 195 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 BFSP2Q13515 415 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 LEXMQ3ZCV2 418 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 NEDD1Q8NHV4 660 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 PURBQ96QR8 312 aaKnown RBP21.47■■□□□ 1.03
UFD1-202ENST00000399523 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
UFD1-202ENST00000399523 UBE2ZQ9H832 354 aaPredicted RBP21.47■■□□□ 1.03
UFD1-202ENST00000399523 GPHNQ9NQX3 736 aaPredicted RBP21.47■■□□□ 1.03
UFD1-202ENST00000399523 MRE11P49959 708 aa21.46■■□□□ 1.03
UFD1-202ENST00000399523 PTPN11Q06124 597 aaPredicted RBP21.46■■□□□ 1.03
UFD1-202ENST00000399523 SIRT2Q8IXJ6 389 aa21.46■■□□□ 1.03
UFD1-202ENST00000399523 GDPD5Q8WTR4 605 aa21.46■■□□□ 1.03
UFD1-202ENST00000399523 LOC102724159A0A0B4J2E5 919 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 HMMRO75330 724 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 ALADP13716 330 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 SLC1A4P43007 532 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 KCNJ6P48051 423 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 PWP2Q15269 919 aaKnown RBP21.45■■□□□ 1.02
UFD1-202ENST00000399523 LRRFIP1Q32MZ4 808 aaKnown RBP21.45■■□□□ 1.02
UFD1-202ENST00000399523 FAM47CQ5HY64 1035 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 SUGCTQ9HAC7 445 aa21.45■■□□□ 1.02
UFD1-202ENST00000399523 EPB41L4AQ9HCS5 686 aaPredicted RBP21.45■■□□□ 1.02
UFD1-202ENST00000399523 KPNA6O60684 536 aa21.44■■□□□ 1.02
UFD1-202ENST00000399523 MCCP23508 829 aa21.44■■□□□ 1.02
UFD1-202ENST00000399523 WDR5P61964 334 aaKnown RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 IKQ13123 557 aaPredicted RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 BRDTQ58F21 947 aaPredicted RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 NSMFQ6X4W1 530 aa21.44■■□□□ 1.02
UFD1-202ENST00000399523 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 OSBP2Q969R2 916 aa21.44■■□□□ 1.02
UFD1-202ENST00000399523 ADD3Q9UEY8 706 aaKnown RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 PRR12Q9ULL5 1215 aa21.44■■□□□ 1.02
UFD1-202ENST00000399523 ISY1Q9ULR0 285 aaKnown RBP21.44■■□□□ 1.02
UFD1-202ENST00000399523 A6NJR5 290 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 TSPY3P0CV98 308 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 TSPY8P0CW00 308 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 ALDH5A1P51649 535 aaPredicted RBP21.43■■□□□ 1.02
UFD1-202ENST00000399523 SNAP25P60880 206 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 ERVK-21P61565 698 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 GPNMBQ14956 572 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 RCSD1Q6JBY9 416 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 OR6J1Q8NGC5 347 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 PANK1Q8TE04 598 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 ZNF318Q5VUA4 2279 aa21.43■■□□□ 1.02
UFD1-202ENST00000399523 TDO2P48775 406 aa21.42■■□□□ 1.02
UFD1-202ENST00000399523 BAATQ14032 418 aaPredicted RBP21.42■■□□□ 1.02
UFD1-202ENST00000399523 TMCO2Q7Z6W1 182 aaPredicted RBP21.42■■□□□ 1.02
UFD1-202ENST00000399523 PPP1R13LQ8WUF5 828 aa21.42■■□□□ 1.02
UFD1-202ENST00000399523 TGS1Q96RS0 853 aaKnown RBP21.42■■□□□ 1.02
UFD1-202ENST00000399523 ZBED2Q9BTP6 218 aa21.42■■□□□ 1.02
UFD1-202ENST00000399523 KCNH6Q9H252 994 aa21.42■■□□□ 1.02
UFD1-202ENST00000399523 CCPG1Q9ULG6 757 aa21.42■■□□□ 1.02
UFD1-202ENST00000399523 RAD50Q92878 1312 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 NKRFO15226 690 aaKnown RBP eCLIP21.41■■□□□ 1.02
UFD1-202ENST00000399523 ICAM1P05362 532 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 GNAT2P19087 354 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 KCNA5P22460 613 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 TFAP4Q01664 338 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 NHLH1Q02575 133 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 KCTD1Q719H9 257 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 CAGE1Q8TC20 777 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 AFAP1L1Q8TED9 768 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 APPBP2Q92624 585 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 RAD9AQ99638 391 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 SIP14410 1827 aa21.41■■□□□ 1.02
UFD1-202ENST00000399523 GPAA1O43292 621 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 GJB5O95377 273 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 IL9P15248 144 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 SSTR3P32745 418 aaPredicted RBP21.4■■□□□ 1.02
UFD1-202ENST00000399523 DEFB103AP81534 67 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 KBTBD3Q8NAB2 608 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 UIMC1Q96RL1 719 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 CTAGE1Q96RT6 745 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 NOD1Q9Y239 953 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms