RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZBTB10Q96DT7 871 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 DIAPH3Q9NSV4 1193 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 LMBRD1Q9NUN5 540 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 MKS1Q9NXB0 559 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 PFDN2Q9UHV9 154 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 GPR52Q9Y2T5 361 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 TNKSO95271 1327 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 ESPNB1AK53 854 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM155AB1AL88 458 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 KIF1CO43896 1103 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 KIF5CO60282 957 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 BBOX1O75936 387 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 IFIT1P09914 478 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 CCT5P48643 541 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 MRE11P49959 708 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 GJA9P57773 515 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 MTERF2Q49AM1 385 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 EAF2Q96CJ1 260 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 JAKMIP1Q96N16 626 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 SEC62Q99442 399 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 RGPD5Q99666 1765 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 SLC5A4Q9NY91 659 aa7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 RABL2AQ9UBK7 228 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM208AQ9UK61 1670 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 VPS37CA5D8V6 355 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 CCDC159P0C7I6 412 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 PAX7P23759 505 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 IL4RP24394 825 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 AK2P54819 239 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SEPT6Q14141 434 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 FXNQ16595 210 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 RAB11FIP4Q86YS3 637 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 C7orf61Q8IZ16 206 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SSH3Q8TE77 659 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 KAZALD1Q96I82 304 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRIM6Q9C030 488 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 DDX21Q9NR30 783 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 CNPY2Q9Y2B0 182 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 PLCH1Q4KWH8 1693 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SALL3Q9BXA9 1300 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 hCG_1642624A0A1W2PR95 340 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 MBD4O95243 580 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 MTHFD1P11586 935 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 HOXD12P35452 270 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 RILPL1Q5EBL4 403 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SRLQ86TD4 932 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 GJD3Q8N144 294 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 GIMAP2Q9UG22 337 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 DDX20Q9UHI6 824 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 TTLL3Q9Y4R7 772 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 A0A0G2JLW4 131 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SERTM1A2A2V5 107 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 CD4P01730 458 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 IGKV5-2P06315 115 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 MPP1Q00013 466 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 PABPC4Q13310 644 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 WWC2Q6AWC2 1192 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 KIAA1211Q6ZU35 1233 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 CATSPER4Q7RTX7 472 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 OR8H1Q8NGG4 311 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 AFAP1L1Q8TED9 768 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 RMI1Q9H9A7 625 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 PDRG1Q9NUG6 133 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 SNX14Q9Y5W7 946 aa7.05□□□□□ -1.28
TRAPPC13-202ENST00000399438 NRAPQ86VF7 1730 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 SPATA31A6Q5VVP1 1343 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 LRP6O75581 1613 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 A0A0D9SFI3 127 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 SYNDIG1LA6NDD5 238 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRIM64A6NGJ6 449 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 TRIM64BA6NI03 449 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 FAM177BA6PVY3 158 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 SASH1O94885 1247 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 MAPK9P45984 424 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 CSRNP1Q96S65 589 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 FSD1Q9BTV5 496 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 SLC13A1Q9BZW2 595 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 RBM28Q9NW13 759 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 DBF4Q9UBU7 674 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 GTF3C4Q9UKN8 822 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 MKL2Q9ULH7 1088 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 MAPRE3Q9UPY8 281 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 PCDHGA11Q9Y5H2 935 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 NCAPD2Q15021 1401 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 F5H423 210 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 A1BGP04217 495 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 ORC1Q13415 861 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 TMED1Q13445 227 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 ARMC4Q5T2S8 1044 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 DPY19L2Q6NUT2 758 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 POTEEQ6S8J3 1075 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 RUFY3Q7L099 469 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 CHST3Q7LGC8 479 aa7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 ZNF589Q86UQ0 364 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-202ENST00000399438 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms