RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PP2D1A8MPX8 630 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TEX33O43247 280 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CCDC175P0C221 793 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CCNE1P24864 410 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 SLC1A4P43007 532 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RBM5P52756 815 aaKnown RBP eCLIP19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RASGRP2Q7LDG7 609 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 PDCL2Q8N4E4 241 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CDK5RAP3Q96JB5 506 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 MMTAG2Q9BU76 263 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 STK32BQ9NY57 414 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 MYH4Q9Y623 1939 aa19.87■□□□□ 0.77
HLA-DQB1-204ENST00000399084 MFAP3LO75121 409 aa19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 EEF2P13639 858 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TXKP42681 527 aa19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ADKP55263 362 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 SLFN13Q68D06 897 aa19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 POTEDQ86YR6 584 aa19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RETREG2Q8NC44 543 aa19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 HERC5Q9UII4 1024 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TNS1Q9HBL0 1735 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CYP3A7-CYP3A51PA0A087WV96 503 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 FGFR1OPO95684 399 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 FOSP01100 380 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CYP3A7P24462 503 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 EIF6P56537 245 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RBL2Q08999 1139 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TRIM65Q6PJ69 517 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 SYT10Q6XYQ8 523 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RTKN2Q8IZC4 609 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 NUP58Q9BVL2 599 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 NT5C3AQ9H0P0 336 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TMEM260Q9NX78 707 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 GDAQ9Y2T3 454 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 DNM2P50570 870 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 PDE4DQ08499 809 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ABCB5Q2M3G0 1257 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 HYIQ5T013 277 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TTI2Q6NXR4 508 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 UNC13DQ70J99 1090 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ZNF710Q8N1W2 664 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 KCTD17Q8N5Z5 321 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 P2RX5Q93086 422 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TMOD2Q9NZR1 351 aa19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 CGNQ9P2M7 1197 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-204ENST00000399084 SLX4Q8IY92 1834 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 KDM3AQ9Y4C1 1321 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 DDTLA6NHG4 134 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 LGALS16A8MUM7 142 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 USP17L10C9JJH3 530 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ASIC1P78348 528 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ATP2B2Q01814 1243 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TUBB2AQ13885 445 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 BTNL9Q6UXG8 535 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 SLFN12Q8IYM2 578 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 LARP4BQ92615 738 aaKnown RBP19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TUBB2BQ9BVA1 445 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 DDX25Q9UHL0 483 aaKnown RBP19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ABCB11O95342 1321 aa19.84■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ZNF646O15015 1829 aaPredicted RBP19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TBX3O15119 743 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 PPP1R11O60927 126 aaPredicted RBP19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TNNI2P48788 182 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ICA1Q05084 483 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 GRB10Q13322 594 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 RBM26Q5T8P6 1007 aaKnown RBP19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 MSL1Q68DK7 614 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TTBK2Q6IQ55 1244 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 IRF2BP1Q8IU81 584 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 ZFPM1Q8IX07 1006 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 TRIM47Q96LD4 638 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 MBOAT7Q96N66 472 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 AMNQ9BXJ7 453 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 KCNQ5Q9NR82 932 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 PCDHA1Q9Y5I3 950 aa19.83■□□□□ 0.77
HLA-DQB1-204ENST00000399084 NCBP1Q09161 790 aaKnown RBP19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TMEM119Q4V9L6 283 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 FKBP1CQ5VVH2 108 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CYP26C1Q6V0L0 522 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 KCTD1Q719H9 257 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PSMD1Q99460 953 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 BMP2KQ9NSY1 1161 aaPredicted RBP19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 PCDHA12Q9UN75 941 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 F5H6K3 240 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 EDIL3O43854 480 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 GYPCP04921 128 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MMP14P50281 582 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 KLRC3Q07444 240 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 TCP10Q12799 353 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 QRICH1Q2TAL8 776 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 SH3BP5LQ7L8J4 393 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 GUF1Q8N442 669 aaKnown RBP19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 CSGALNACT2Q8N6G5 542 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 MB21D1Q8N884 522 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 RAD54LQ92698 747 aa19.82■□□□□ 0.76
HLA-DQB1-204ENST00000399084 DNAI1Q9UI46 699 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms