RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 I3L4J1 428 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ZBTB7BO15156 539 aaPredicted RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 MGEA5O60502 916 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 STX2P32856 288 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ANKRD20A3Q5VUR7 823 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 RSAD2Q8WXG1 361 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 HOOK2Q96ED9 719 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 LRRN2O75325 713 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 APOEP02649 317 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 OSBPP22059 807 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 CTNNA1P35221 906 aaKnown RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 EIF4A1P60842 406 aaKnown RBP10.23□□□□□ -0.77
ATL3-201ENST00000398868 CHURC1Q8WUH1 139 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ZNF341Q9BYN7 854 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 PPP1R9AQ9ULJ8 1098 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 M0R2C6 588 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 SNX1Q13596 522 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 DBN1Q16643 649 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 ARMC9Q7Z3E5 817 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 CCDC13Q8IYE1 715 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 CFAP61Q8NHU2 1237 aa10.23□□□□□ -0.77
ATL3-201ENST00000398868 GOLGA8IPA6NC78 632 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 GOLGA8JA6NMD2 632 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 AGRPO00253 132 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 GYS2P54840 703 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 HACE1Q8IYU2 909 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 PIP4K2CQ8TBX8 421 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 FAM149B1Q96BN6 582 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 NOX5Q96PH1 765 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ADPGKQ9BRR6 497 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 DPH5Q9H2P9 285 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 UPP2O95045 317 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 XPAP23025 273 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 IFNAR2P48551 515 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 AK9Q5TCS8 1911 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 RSPH3Q86UC2 560 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ZBTB40Q9NUA8 1239 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 PCDHA1Q9Y5I3 950 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 TMEM191BP0C7N4 346 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 DMP1Q13316 513 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 IL17REQ8NFR9 667 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 POLR3AO14802 1390 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 RGS16O15492 202 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 STAM2O75886 525 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 TFAMQ00059 246 aaKnown RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 PLCB4Q15147 1175 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 DCAF15Q66K64 600 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ARMCX5Q6P1M9 558 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ZNF577Q9BSK1 485 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 STMN1P16949 149 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 INPP1P49441 399 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 POSTNQ15063 836 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 CDO1Q16878 200 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 MYSM1Q5VVJ2 828 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ZNF772Q68DY9 489 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
ATL3-201ENST00000398868 GLYCTKQ8IVS8 523 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 ZBTB8OSQ8IWT0 167 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 SMC5Q8IY18 1101 aa10.22□□□□□ -0.77
ATL3-201ENST00000398868 GOLGA8SH3BPF8 625 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 TNNC2P02585 160 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 EIF2AK2P19525 551 aaKnown RBP10.21□□□□□ -0.77
ATL3-201ENST00000398868 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
ATL3-201ENST00000398868 RCN2Q14257 317 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 ZNF215Q9UL58 517 aaPredicted RBP10.21□□□□□ -0.77
ATL3-201ENST00000398868 MAD1L1Q9Y6D9 718 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 IL16Q14005 1332 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 PCDHB4Q9Y5E5 795 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 CHRNA5P30532 468 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 ACRBPQ8NEB7 543 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 GDAP1Q8TB36 358 aa10.21□□□□□ -0.77
ATL3-201ENST00000398868 ATP2B4P23634 1241 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.21□□□□□ -0.78
ATL3-201ENST00000398868 GRAMD1CQ8IYS0 662 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 ERLEC1Q96DZ1 483 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 KIF21AQ7Z4S6 1674 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 GSTA1P08263 222 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 GSTA2P09210 222 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 ZSCAN20P17040 1043 aaPredicted RBP10.21□□□□□ -0.78
ATL3-201ENST00000398868 TUBB4BP68371 445 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 BRD3Q15059 726 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 LRRC23Q53EV4 343 aaPredicted RBP10.21□□□□□ -0.78
ATL3-201ENST00000398868 ANKRD13CQ8N6S4 541 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 KBTBD3Q8NAB2 608 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 PTPRKQ15262 1439 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 DUOX2Q9NRD8 1548 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 ZNF394Q53GI3 561 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 FAM178BQ8IXR5 827 aa10.21□□□□□ -0.78
ATL3-201ENST00000398868 TNKSO95271 1327 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms