RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 ANKRD35Q8N283 1001 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 GMCL1P1Q8NEA9 526 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 FGD4Q96M96 766 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 GUCD1Q96NT3 240 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 FAM184BQ9ULE4 1060 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 PCDHB3Q9Y5E6 796 aa11.65□□□□□ -0.54
NIFKP1-201ENST00000398317 SYNRGQ9UMZ2 1314 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 VCANP13611 3396 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 TMEM232C9JQI7 657 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 ADCY6O43306 1168 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 SLC3A2P08195 630 aaKnown RBP11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 CLTBP09497 229 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 MX1P20591 662 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 SNAP25P60880 206 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 ACVR2BQ13705 512 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 KCNA10Q16322 511 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 PUS10Q3MIT2 529 aaKnown RBP11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 MSL3Q8N5Y2 521 aaKnown RBP11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 KLHDC9Q8NEP7 349 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
NIFKP1-201ENST00000398317 FOXP2O15409 715 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 NMT2O60551 498 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 MCCP23508 829 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 ACLYP53396 1101 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 EPHB4P54760 987 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 CNTN2Q02246 1040 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 IKQ13123 557 aaPredicted RBP11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 ZNF697Q5TEC3 545 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 ARMCX2Q7L311 632 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 RASGRP2Q7LDG7 609 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 CHST13Q8NET6 341 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 TSEN34Q9BSV6 310 aaKnown RBP11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 TMEM39AQ9NV64 488 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 SYNPO2Q9UMS6 1093 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
NIFKP1-201ENST00000398317 TSPY2A6NKD2 308 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 DUSP11O75319 330 aaKnown RBP11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 C6orf222P0C671 652 aaPredicted RBP11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 RAG1P15918 1043 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 SLC1A4P43007 532 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 STAT2P52630 851 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 OAZ1P54368 228 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 FAAP100Q0VG06 881 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CCSAPQ6IQ19 270 aaPredicted RBP11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CCDC144CPQ8IYA2 1237 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CHURC1Q8WUH1 139 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 NUP133Q8WUM0 1156 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 VTI1AQ96AJ9 217 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 CRBNQ96SW2 442 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 ABHD16BQ9H3Z7 469 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 IL17RBQ9NRM6 502 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 FBXO40Q9UH90 709 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 STX8Q9UNK0 236 aa11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 DDX49Q9Y6V7 483 aaKnown RBP11.62□□□□□ -0.55
NIFKP1-201ENST00000398317 ZNF536O15090 1300 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 LCTP09848 1927 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 DCDC2CA8MYV0 355 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 ACTN4O43707 911 aaKnown RBP11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 ASGR1P07306 291 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 ALAS1P13196 640 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 ANKRD33Q7Z3H0 272 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 FAM160B2Q86V87 743 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 RNPC3Q96LT9 517 aaKnown RBP11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 KATNBL1Q9H079 304 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 SEMA6BQ9H3T3 888 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 ACAD9Q9H845 621 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 RNF146Q9NTX7 359 aa11.61□□□□□ -0.55
NIFKP1-201ENST00000398317 TLL1O43897 1013 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 FDX1P10109 184 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 PTGS1P23219 599 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 GJA9P57773 515 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 SMAD3P84022 425 aaKnown RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 FPGSQ05932 587 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 MUM1L1Q5H9M0 696 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 GNASQ5JWF2 1037 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms