RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PDS5AQ29RF7 1337 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 TARSL2A2RTX5 802 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 RCCD1A6NED2 376 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 TSPY2A6NKD2 308 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 A6NNZ2 444 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 TUBB8Q3ZCM7 444 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 LACRTQ9GZZ8 138 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 TMEM60Q9H2L4 133 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
CHMP1A-201ENST00000397901 A0A1W2PQC6 194 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 AGPSO00116 658 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 MYO1FO00160 1098 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 GCFC2P16383 781 aaKnown RBP17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 ERCC3P19447 782 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 EEF1GP26641 437 aaKnown RBP17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 GNGT1P63211 74 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 DTHD1Q6ZMT9 781 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 CAGE1Q8TC20 777 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 N4BP2L2Q92802 583 aaPredicted RBP17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 MTMR7Q9Y216 660 aa17.77■□□□□ 0.43
CHMP1A-201ENST00000397901 ZNF185O15231 689 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 TRIM21P19474 475 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 BTAF1O14981 1849 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 PSMA7O14818 248 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 KLRC4O43908 158 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 ORC4O43929 436 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 CALML3P27482 149 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 UBA7P41226 1012 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 TYW1BQ6NUM6 668 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 FAXDC2Q96IV6 333 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 FAM84BQ96KN1 310 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 HINFPQ9BQA5 517 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 THAP9Q9H5L6 903 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 DUSP10Q9Y6W6 482 aa17.76■□□□□ 0.43
CHMP1A-201ENST00000397901 CCDC194A0A1B0GVG4 234 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 MACROD2A1Z1Q3 448 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 KLRK1P26718 216 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 KRT83P78385 493 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 CYP27A1Q02318 531 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 MECOMQ03112 1051 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 SLC10A5Q5PT55 438 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 PAPD7Q5XG87 772 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 STAG2Q8N3U4 1231 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 LRRC15Q8TF66 581 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 BSDC1Q9NW68 430 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 PCDHA4Q9UN74 947 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 MEFVO15553 781 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 KRT86O43790 486 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 INF2Q27J81 1249 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 RC3H1Q5TC82 1133 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 RCSD1Q6JBY9 416 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 TTI2Q6NXR4 508 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 TEX11Q8IYF3 940 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 CSGALNACT2Q8N6G5 542 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 NSUN4Q96CB9 384 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 TUBGCP2Q9BSJ2 902 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 EHD4Q9H223 541 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 NHEJ1Q9H9Q4 299 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 EXOC1Q9NV70 894 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 JAG2Q9Y219 1238 aa17.75■□□□□ 0.43
CHMP1A-201ENST00000397901 THSD7AQ9UPZ6 1657 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 DLEC1Q9Y238 1755 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 GOLGA6BA6NDN3 693 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 KIF5BP33176 963 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 CYLC1P35663 651 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 DNM2P50570 870 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 WLSQ5T9L3 541 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 SH3GL2Q99962 352 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 ZNHIT6Q9NWK9 470 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 ODF2LQ9ULJ1 636 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 COL24A1Q17RW2 1714 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 RASSF10A6NK89 507 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 GOLGA8KD6RF30 607 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 PDE2AO00408 941 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 SRGNP10124 158 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 UBE4AQ14139 1066 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 KCNB1Q14721 858 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 MICALCLQ6ZW33 695 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 FMNL3Q8IVF7 1028 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 GIMAP8Q8ND71 665 aaPredicted RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 DUSP9Q99956 384 aaKnown RBP17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
CHMP1A-201ENST00000397901 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 MYBL2P10244 700 aa17.73■□□□□ 0.43
CHMP1A-201ENST00000397901 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms