RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 USP40Q9NVE5 1235 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 FAM53CQ9NYF3 392 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MAGEC2Q9UBF1 373 aaPredicted RBP20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 KLRG2A4D1S0 409 aaPredicted RBP20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 EDIL3O43854 480 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ATP2B2Q01814 1243 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ANKRD40Q6AI12 368 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TTBK2Q6IQ55 1244 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 COA1Q9GZY4 146 aa20.53■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ESYT2A0FGR8 921 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SEC31AO94979 1220 aaKnown RBP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ADCY7P51828 1080 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CALCRLQ16602 461 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLC35F6Q8N357 371 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SERPINB13Q9UIV8 391 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TRPC5Q9UL62 973 aaPredicted RBP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 FHOD1Q9Y613 1164 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TFRCP02786 760 aaKnown RBP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLC16A2P36021 539 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 P2RX5Q93086 422 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 CALML4Q96GE6 196 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 DHTKD1Q96HY7 919 aaPredicted RBP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MTMR9Q96QG7 549 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 C7orf25Q9BPX7 421 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 TUBGCP2Q9BSJ2 902 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 MAGEF1Q9HAY2 307 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 ARGLU1Q9NWB6 273 aaPredicted RBP20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 LRWD1Q9UFC0 647 aa20.52■□□□□ 0.88
CHRFAM7A-202ENST00000397827 POTEMA6NI47 508 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 UBE2SQ16763 222 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RSRC2Q7L4I2 434 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PUF60Q9UHX1 559 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 FOCADQ5VW36 1801 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 MPHOSPH10O00566 681 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SNHG28P0DPA3 235 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CYP2C19P33261 490 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KLK7P49862 253 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 GRB10Q13322 594 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TMCO3Q6UWJ1 677 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ADGRF4Q8IZF3 695 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 JMJD4Q9H9V9 463 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SLC39A2Q9NP94 309 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RSPH14Q9UHP6 348 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 LUC7L2Q9Y383 392 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PLIN4Q96Q06 1357 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 LTBP1Q14766 1721 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PPP1R11O60927 126 aaPredicted RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TTLL1O95922 423 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CCNE1P24864 410 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ARHGAP25P42331 645 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TNNI2P48788 182 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 BMS1Q14692 1282 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KIF4BQ2VIQ3 1234 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PROM2Q8N271 834 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KIAA0895Q8NCT3 520 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CCDC47Q96A33 483 aaKnown RBP20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
CHRFAM7A-202ENST00000397827 MCM6Q14566 821 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 DYMQ7RTS9 669 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 OR8K1Q8NGG5 319 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 GJA10Q969M2 543 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 NUDT12Q9BQG2 462 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 BLOC1S4Q9NUP1 217 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TRIM10Q9UDY6 481 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 EPN1Q9Y6I3 576 aaPredicted RBP20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 A0A1W2PQC6 194 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PNMA6AP0CW24 399 aaPredicted RBP20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SHMT1P34896 483 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ZNF543Q08ER8 600 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 NFIAQ12857 509 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 KCTD1Q719H9 257 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CNOT6LQ96LI5 555 aaKnown RBP20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 AGPAT5Q9NUQ2 364 aa20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 REXO2Q9Y3B8 237 aaKnown RBP20.5■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ZRANB2O95218 330 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 NDUFA10O95299 355 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 AMPD3Q01432 767 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CDC42EP5Q6NZY7 148 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 GPR161Q8N6U8 529 aaKnown RBP20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 PNMA5Q96PV4 448 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TFR2Q9UP52 801 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 MYMKA6NI61 221 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 DNM2P50570 870 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 WDR59Q6PJI9 974 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 UIMC1Q96RL1 719 aa20.49■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CTAGE9A4FU28 777 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 hCG_1984214I3L0E3 225 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 RAD21O60216 631 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 SRGNP10124 158 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 FAM193AP78312 1265 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 TBC1D8BQ0IIM8 1120 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ZFPM1Q8IX07 1006 aa20.48■□□□□ 0.87
CHRFAM7A-202ENST00000397827 ZNF713Q8N859 430 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms