RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ADORA2AP29274 412 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 PKP1Q13835 747 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 DPP9Q86TI2 863 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 SIAH1Q8IUQ4 282 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 FAM161BQ96MY7 647 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 RNF26Q9BY78 433 aaPredicted RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 PRKAG2Q9UGJ0 569 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
SEC13-209ENST00000397117 A0A0G2JMZ2 1700 aa15.28■□□□□ 0.04
SEC13-209ENST00000397117 KLRF2D3W0D1 207 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 COBLO75128 1261 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 DEXIO95424 95 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 SHHQ15465 462 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 CCDC96Q2M329 555 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.03
SEC13-209ENST00000397117 SLFN13Q68D06 897 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 STAG2Q8N3U4 1231 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 SRBD1Q8N5C6 995 aaKnown RBP15.27■□□□□ 0.03
SEC13-209ENST00000397117 GMCL1P1Q8NEA9 526 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 SHCBP1Q8NEM2 672 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 DCAF4Q8WV16 495 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.03
SEC13-209ENST00000397117 GOPCQ9HD26 462 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.03
SEC13-209ENST00000397117 F5H6K3 240 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
SEC13-209ENST00000397117 BRD1O95696 1058 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 SNHG28P0DPA3 235 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 SLC1A4P43007 532 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 FOSBP53539 338 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 KLRC3Q07444 240 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 SNX17Q15036 470 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
SEC13-209ENST00000397117 C8orf76Q96K31 380 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 SPATC1LQ9H0A9 340 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 V9GY48 417 aaPredicted RBP15.26■□□□□ 0.03
SEC13-209ENST00000397117 PARP14Q460N5 1801 aa15.26■□□□□ 0.03
SEC13-209ENST00000397117 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
SEC13-209ENST00000397117 SEPT4O43236 478 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 ZSCAN22P10073 491 aaPredicted RBP15.25■□□□□ 0.03
SEC13-209ENST00000397117 ERCC3P19447 782 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 FUT2Q10981 343 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 TRIM29Q14134 588 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 C9orf50Q5SZB4 431 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 ZNF697Q5TEC3 545 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 RASGRP2Q7LDG7 609 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 CDX2Q99626 313 aaPredicted RBP15.25■□□□□ 0.03
SEC13-209ENST00000397117 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 GPCPD1Q9NPB8 672 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 MTMR6Q9Y217 621 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 CNTNAP5Q8WYK1 1306 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 KBTBD13C9JR72 458 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 NDUFB10O96000 172 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 DSG3P32926 999 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 ANO1Q5XXA6 986 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 TNPO1Q92973 898 aaKnown RBP15.25■□□□□ 0.03
SEC13-209ENST00000397117 GMCL1Q96IK5 515 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
SEC13-209ENST00000397117 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 XBP1P17861 261 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 SMARCA1P28370 1054 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 TRIM60Q495X7 471 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 PRAMEF19Q5SWL8 479 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 C1orf53Q5VUE5 145 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 KCTD1Q719H9 257 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 MB21D1Q8N884 522 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 BADQ92934 168 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 TANGO6Q9C0B7 1094 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 MROH8Q9H579 483 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 PDLIM7Q9NR12 457 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
SEC13-209ENST00000397117 ADCYAP1R1P41586 468 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 LRRC41Q15345 812 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 SPICE1Q8N0Z3 855 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 FBXO18Q8NFZ0 1043 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
SEC13-209ENST00000397117 VCPKMTQ9H867 229 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 SLC5A4Q9NY91 659 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
SEC13-209ENST00000397117 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
SEC13-209ENST00000397117 COL11A1P12107 1806 aaPredicted RBP15.23■□□□□ 0.03
SEC13-209ENST00000397117 PLXNA1Q9UIW2 1896 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 TRIM43BA6NCK2 446 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 F13A1P00488 732 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 BMP3P12645 472 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
SEC13-209ENST00000397117 GUCY1B3Q02153 619 aa15.22■□□□□ 0.03
SEC13-209ENST00000397117 IKQ13123 557 aaPredicted RBP15.22■□□□□ 0.03
SEC13-209ENST00000397117 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms