RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 TTBK2Q6IQ55 1244 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 C4orf32Q8N8J7 132 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 GAKO14976 1311 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 POTEMA6NI47 508 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 SPDYE3A6NKU9 549 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 ERCC3P19447 782 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 KRT83P78385 493 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 CEP112Q8N8E3 955 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 MED15Q96RN5 788 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 WDR24Q96S15 920 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 PCDHA1Q9Y5I3 950 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 ADGRG1Q9Y653 693 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 SCN7AQ01118 1682 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 NUP58Q9BVL2 599 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 GLT8D2Q9H1C3 349 aa12.91□□□□□ -0.34
PDXDC1-202ENST00000396410 CCDC88AQ3V6T2 1871 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 RREB1Q92766 1687 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 RHOBTB3O94955 611 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 GYPCP04921 128 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 USH1GQ495M9 461 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 L2HGDHQ9H9P8 463 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 ICA1Q05084 483 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 ZNF543Q08ER8 600 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 RAD9BQ6WBX8 426 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 NAPGQ99747 312 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 STK17AQ9UEE5 414 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 ZBTB5O15062 677 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 KIF20AO95235 890 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 GPS2Q13227 327 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 CCDC122Q5T0U0 273 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 MRPL44Q9H9J2 332 aaKnown RBP12.9□□□□□ -0.34
PDXDC1-202ENST00000396410 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.35
PDXDC1-202ENST00000396410 SRGNP10124 158 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 FCER1AP12319 257 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 MTRQ99707 1265 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 DHX36Q9H2U1 1008 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 IRS2Q9Y4H2 1338 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 LGALS16A8MUM7 142 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 KANSL2Q9H9L4 492 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CTAGE15A4D2H0 777 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 KRT86O43790 486 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 ERLIN1O75477 346 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 GDF11O95390 407 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CTAGE6Q86UF2 777 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 SMAP1Q8IYB5 467 aaPredicted RBP12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 JMJD4Q9H9V9 463 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 TRAF5O00463 557 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 TRIM65Q6PJ69 517 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 HHIPL2Q6UWX4 724 aa12.89□□□□□ -0.35
PDXDC1-202ENST00000396410 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC65Q8IXS2 484 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 ECM29Q5VYK3 1845 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 STK4Q13043 487 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 SLC35F6Q8N357 371 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 ARFGAP3Q9NP61 516 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 AKR1B10O60218 316 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 NFIAQ12857 509 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 ABCB5Q2M3G0 1257 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 NAALADL2Q58DX5 795 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 TMEM139Q8IV31 216 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 C7orf25Q9BPX7 421 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
PDXDC1-202ENST00000396410 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 SEMA3FQ13275 785 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms