RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PCDHA6Q9UN73 950 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 PCDHA8Q9Y5H6 950 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 ADGRA2Q96PE1 1338 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 CYP3A4P08684 503 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCR9-203ENST00000395963 PDE4CQ08493 712 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 IRF5Q13568 498 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 DEFB115Q30KQ5 88 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 KCNG4Q8TDN1 519 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 SPATC1LQ9H0A9 340 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 CPVLQ9H3G5 476 aa10.08□□□□□ -0.8
CCR9-203ENST00000395963 COL11A1P12107 1806 aaPredicted RBP10.08□□□□□ -0.8
CCR9-203ENST00000395963 SPDYE3A6NKU9 549 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 PPP6R2O75170 966 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 SNRNP48Q6IEG0 339 aaKnown RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 PPP4R3AQ6IN85 833 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 DNERQ8NFT8 737 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 COA7Q96BR5 231 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 P2RX7Q99572 595 aaKnown RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 MEIS2O14770 477 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 SLC26A4O43511 780 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 STRNO43815 780 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 BAG4O95429 457 aaKnown RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 SREBF1P36956 1147 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 PKP1Q13835 747 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 CCDC174Q6PII3 467 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 NIPA1Q7RTP0 329 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 NEK8Q86SG6 692 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 IFNL1Q8IU54 200 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 GPRC5AQ8NFJ5 357 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 SMCR8Q8TEV9 937 aaPredicted RBP10.07□□□□□ -0.8
CCR9-203ENST00000395963 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 SHISA4Q96DD7 197 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 RPTORQ8N122 1335 aa10.07□□□□□ -0.8
CCR9-203ENST00000395963 CYP3A7-CYP3A51PA0A087WV96 503 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 TBX3O15119 743 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 CYP3A7P24462 503 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 MAPK4P31152 587 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 CIITAP33076 1130 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 PRPHP41219 470 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 ERVK-24P63145 666 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
CCR9-203ENST00000395963 MBOAT7Q96N66 472 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 TRERF1Q96PN7 1200 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 RCOR1Q9UKL0 485 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 STK24Q9Y6E0 443 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 CNMDO75829 334 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 CRYGNQ8WXF5 182 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 ANO3Q9BYT9 981 aa10.06□□□□□ -0.8
CCR9-203ENST00000395963 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
CCR9-203ENST00000395963 DIS3Q9Y2L1 958 aaKnown RBP10.06□□□□□ -0.8
CCR9-203ENST00000395963 hCG_1642624A0A1W2PR95 340 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 ESPNB1AK53 854 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 OPLAHO14841 1288 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 ALAS1P13196 640 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 SETQ01105 290 aaPredicted RBP10.05□□□□□ -0.8
CCR9-203ENST00000395963 GUCY1B3Q02153 619 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 USH1GQ495M9 461 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 RNF207Q6ZRF8 634 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
CCR9-203ENST00000395963 MSL3Q8N5Y2 521 aaKnown RBP10.05□□□□□ -0.8
CCR9-203ENST00000395963 FERMT2Q96AC1 680 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 RBPJLQ9UBG7 517 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 ADD3Q9UEY8 706 aaKnown RBP10.05□□□□□ -0.8
CCR9-203ENST00000395963 MAFGO15525 162 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 CA12O43570 354 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 BCRP11274 1271 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 TTC38Q5R3I4 469 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
CCR9-203ENST00000395963 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 CAPNS2Q96L46 248 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
CCR9-203ENST00000395963 TLR2O60603 784 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 NR5A1Q13285 461 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 DGKZQ13574 1117 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 SLC39A14Q15043 492 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 SKOR2Q2VWA4 1001 aaPredicted RBP10.04□□□□□ -0.8
CCR9-203ENST00000395963 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 FERMT3Q86UX7 667 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 ZNF579Q8NAF0 562 aaKnown RBP10.04□□□□□ -0.8
CCR9-203ENST00000395963 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 PTPN18Q99952 460 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 PYM1Q9BRP8 204 aaKnown RBP10.04□□□□□ -0.8
CCR9-203ENST00000395963 MOV10L1Q9BXT6 1211 aaKnown RBP10.04□□□□□ -0.8
CCR9-203ENST00000395963 SLC5A4Q9NY91 659 aa10.04□□□□□ -0.8
CCR9-203ENST00000395963 BTBD7Q9P203 1132 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms