RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 CD163Q86VB7 1156 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 ANKLE2Q86XL3 938 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 SPACA3Q8IXA5 215 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 IFNL3Q8IZI9 196 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 USHBP1Q8N6Y0 703 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 IGSF22Q8N9C0 903 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
HMGB1P10-201ENST00000395823 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 M0R2C6 588 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 TRAF5O00463 557 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 BRINP1O60477 761 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 F13BP05160 661 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 SYPP08247 313 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 SEPHS1P49903 392 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 DSG1Q02413 1049 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 KCNAB2Q13303 367 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 CYP27C1Q4G0S4 372 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 EEF1DP3Q658K8 133 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 ALYREFQ86V81 257 aaKnown RBP6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 SPATS2Q86XZ4 545 aaKnown RBP6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 KIF18BQ86Y91 864 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 FBXL6Q8N531 539 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 LINC00116Q8NCU8 138 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 RCBTB1Q8NDN9 531 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 TSR2Q969E8 191 aaKnown RBP6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 WNK4Q96J92 1243 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 MFSD14AQ96MC6 490 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 FBXL7Q9UJT9 491 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 RAXQ9Y2V3 346 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 COQ6Q9Y2Z9 468 aa6.84□□□□□ -1.31
HMGB1P10-201ENST00000395823 FAM155AB1AL88 458 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 FGF10O15520 208 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 F2P00734 622 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 GSTM1P09488 218 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 MECP2P51608 486 aaKnown RBP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 EPHB1P54762 984 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 TMPRSS15P98073 1019 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 LRRC41Q15345 812 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 DDX53Q86TM3 631 aaKnown RBP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 NXPE1Q8N323 547 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 OR2W6PQ8NHA6 318 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 DIO2Q92813 273 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 USP7Q93009 1102 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 TTC1Q99614 292 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 IFT22Q9H7X7 185 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 AP5S1Q9NUS5 200 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 PPARGC1AQ9UBK2 798 aaKnown RBP6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 PLAGL2Q9UPG8 496 aa6.83□□□□□ -1.32
HMGB1P10-201ENST00000395823 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 C1QTNF9BB2RNN3 333 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 WNT9AO14904 365 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 ZEB2O60315 1214 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 SRGAP2CP0DJJ0 459 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 NOP2P46087 812 aaKnown RBP6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 CEBPAP49715 358 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 KSR1Q8IVT5 923 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 MMP19Q99542 508 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 SMAD5Q99717 465 aaKnown RBP6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 CELF4Q9BZC1 486 aaKnown RBP6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 CDIP1Q9H305 208 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 TCFL5Q9UL49 500 aa6.82□□□□□ -1.32
HMGB1P10-201ENST00000395823 H3BS24 57 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 TSPAN6O43657 245 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 FKTNO75072 461 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 NAT1P18440 290 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 SCNN1BP51168 640 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 NEK2P51955 445 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 PAK1Q13153 545 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 TMEM177Q53S58 311 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 CREB3L3Q68CJ9 461 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 RNF43Q68DV7 783 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 ZPBP2Q6X784 338 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 HSPA12BQ96MM6 686 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 PTCHD1Q96NR3 888 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 PUS7LQ9H0K6 701 aaKnown RBP6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 TRIT1Q9H3H1 467 aaKnown RBP6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 SEMA3GQ9NS98 782 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 TRHDEQ9UKU6 1024 aa6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 APOBEC2Q9Y235 224 aaKnown RBP6.81□□□□□ -1.32
HMGB1P10-201ENST00000395823 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 SHTN1A0MZ66 631 aa6.8□□□□□ -1.32
HMGB1P10-201ENST00000395823 GABRDO14764 452 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms