RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DAGLBQ8NCG7 672 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 NOC3LQ8WTT2 800 aaKnown RBP20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 JAKMIP2Q96AA8 810 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 EXOC1Q9NV70 894 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 HIBADHP31937 336 aaKnown RBP20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 DHTKD1Q96HY7 919 aaPredicted RBP20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 LACRTQ9GZZ8 138 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 FLT1P17948 1338 aa20.51■□□□□ 0.87
PCDHA1-202ENST00000394633 CYTH3O43739 400 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 SEMA3FQ13275 785 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 CSGALNACT2Q8N6G5 542 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 CWC15Q9P013 229 aaKnown RBP20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 FEZ2Q9UHY8 353 aaPredicted RBP20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 STXBP3O00186 592 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 CYLC1P35663 651 aaPredicted RBP20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 HSP90B2PQ58FF3 399 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 DYNLL2Q96FJ2 89 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 EEF2KMTQ96G04 330 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 CAPZA3Q96KX2 299 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 JAG2Q9Y219 1238 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
PCDHA1-202ENST00000394633 KRT86O43790 486 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 PHACTR2O75167 634 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 C12orf60Q5U649 245 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 HEATR3Q7Z4Q2 680 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 NUP58Q9BVL2 599 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 ACBD3Q9H3P7 528 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 NHEJ1Q9H9Q4 299 aaPredicted RBP20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 MED4Q9NPJ6 270 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 PLCG1P19174 1290 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 TRIM21P19474 475 aaKnown RBP20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 CCNE1P24864 410 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 PRPHP41219 470 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 GNAQP50148 359 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 ANKRD40Q6AI12 368 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 LEKR1Q6ZMV7 388 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 EHBP1Q8NDI1 1231 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 P2RX5Q93086 422 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 CNOT6LQ96LI5 555 aaKnown RBP20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 VIPAS39Q9H9C1 493 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 LCMT1Q9UIC8 334 aa20.49■□□□□ 0.87
PCDHA1-202ENST00000394633 NAV1Q8NEY1 1877 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 EIF3CLB5ME19 914 aaKnown RBP20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 LAD1O00515 517 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 BBOX1O75936 387 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 ZBED6P86452 979 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 TBC1D8BQ0IIM8 1120 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 GALNT17Q6IS24 598 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 CABP7Q86V35 215 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 EIF3CQ99613 913 aaKnown RBP20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 BARHL2Q9NY43 387 aa20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 MKRN1Q9UHC7 482 aaKnown RBP20.48■□□□□ 0.87
PCDHA1-202ENST00000394633 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 PDE6BP35913 854 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 CKAP4Q07065 602 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 USP17L1Q7RTZ2 530 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 CCDC170Q8IYT3 715 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 RETREG2Q8NC44 543 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 CUEDC2Q9H467 287 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 ZNHIT6Q9NWK9 470 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 A0A0U1RQG5 324 aaPredicted RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 TARSL2A2RTX5 802 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 RPS6KA5O75582 802 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 UFL1O94874 794 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 NPR1P16066 1061 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 CHRNA5P30532 468 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 AARSP49588 968 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 PDE4DQ08499 809 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 STK4Q13043 487 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 MIIPQ5JXC2 388 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 RPGRIP1Q96KN7 1286 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 PURBQ96QR8 312 aaKnown RBP20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 TRIM9Q9C026 710 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 TSPYL1Q9H0U9 437 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 MAGEF1Q9HAY2 307 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 DUSP10Q9Y6W6 482 aa20.47■□□□□ 0.87
PCDHA1-202ENST00000394633 BICDL2A1A5D9 508 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 PDE2AO00408 941 aaPredicted RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 SYF2O95926 243 aaKnown RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 MCM3P25205 808 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 CCDC178Q5BJE1 867 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 POLLQ9UGP5 575 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 HPCAL4Q9UM19 191 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 NKRFO15226 690 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 ZNF185O15231 689 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 TNNT3P45378 269 aaPredicted RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 MTIF2P46199 727 aaKnown RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 CYP27A1Q02318 531 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 SLC20A2Q08357 652 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 DZIP1Q86YF9 867 aaKnown RBP20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 FAM204AQ9H8W3 233 aa20.46■□□□□ 0.87
PCDHA1-202ENST00000394633 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms