RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SESN3P58005 492 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 KRT31Q15323 416 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 ZC2HC1CQ53FD0 456 aaPredicted RBP13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 KRT26Q7Z3Y9 468 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
SLC28A1-203ENST00000394573 MOCS3O95396 460 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 IFI16Q16666 785 aaKnown RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 SLC35B4Q969S0 331 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 DACH1Q9UI36 760 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 GNA14O95837 355 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 CTNNA1P35221 906 aaKnown RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 IFNAR2P48551 515 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 MCL1Q07820 350 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 ZNF844Q08AG5 666 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 EAF2Q96CJ1 260 aaPredicted RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 DDX23Q9BUQ8 820 aaKnown RBP13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
SLC28A1-203ENST00000394573 FECHP22830 423 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 HSD17B3P37058 310 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 LBRQ14739 615 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 RASIP1Q5U651 963 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 SPATA1Q5VX52 437 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 DZIP3Q86Y13 1208 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 XPO6Q96QU8 1125 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 SH3TC1Q8TE82 1336 aa13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-203ENST00000394573 SRRM3A6NNA2 597 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 HIP1O00291 1037 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 FLOT1O75955 427 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 GSTA1P08263 222 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 ALOX15P16050 662 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 ATP6V1C1P21283 382 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 PI16Q6UXB8 463 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 DDX42Q86XP3 938 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 CD302Q8IX05 232 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 UBLCP1Q8WVY7 318 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 STAMQ92783 540 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 DDX27Q96GQ7 796 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 KRT12Q99456 494 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 ARPC5LQ9BPX5 153 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 DDX50Q9BQ39 737 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 SELENOSQ9BQE4 189 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 ETNK2Q9NVF9 386 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 LRWD1Q9UFC0 647 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 CTNND2Q9UQB3 1225 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 PLOD1Q02809 727 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 UBXN1Q04323 297 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 AFAP1Q8N556 730 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 CORO1BQ9BR76 489 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 DMAP1Q9NPF5 467 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
SLC28A1-203ENST00000394573 ATP7BP35670 1465 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 DPYDQ12882 1025 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 PTPAQ15257 358 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 DDB1Q16531 1140 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 WDR59Q6PJI9 974 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 RUFY4Q6ZNE9 571 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 FAM81BQ96LP2 452 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 CARD9Q9H257 536 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 EID1Q9Y6B2 187 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 CETN3O15182 167 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 VCXQ9H320 206 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 SAMD15Q9P1V8 674 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 LRRC42Q9Y546 428 aa13.76□□□□□ -0.21
SLC28A1-203ENST00000394573 SMIM23A6NLE4 172 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms