RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RASEFQ8IZ41 740 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 TMTC2Q8N394 836 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 CTCFLQ8NI51 663 aaPredicted RBP35.72■■■■□ 3.31
CMTM4-202ENST00000394106 NEK1Q96PY6 1258 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 PIGSQ96S52 555 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 RIOX1Q9H6W3 641 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 SPC25Q9HBM1 224 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 VTA1Q9NP79 307 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 ATP11BQ9Y2G3 1177 aa35.72■■■■□ 3.31
CMTM4-202ENST00000394106 PPP1R11O60927 126 aaPredicted RBP35.71■■■■□ 3.31
CMTM4-202ENST00000394106 IRX5P78411 483 aaPredicted RBP35.71■■■■□ 3.31
CMTM4-202ENST00000394106 HABP4Q5JVS0 413 aaKnown RBP35.71■■■■□ 3.31
CMTM4-202ENST00000394106 MPHOSPH6Q99547 160 aaKnown RBP35.71■■■■□ 3.31
CMTM4-202ENST00000394106 LOC102724159A0A0B4J2E5 919 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 CYTH3O43739 400 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 PDE4DQ08499 809 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 PWP2Q15269 919 aaKnown RBP35.7■■■■□ 3.31
CMTM4-202ENST00000394106 TAPT1Q6NXT6 567 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 KLHDC9Q8NEP7 349 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 DNERQ8NFT8 737 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 TSEN34Q9BSV6 310 aaKnown RBP35.7■■■■□ 3.31
CMTM4-202ENST00000394106 UPF3AQ9H1J1 476 aaKnown RBP35.7■■■■□ 3.31
CMTM4-202ENST00000394106 PCDHA1Q9Y5I3 950 aa35.7■■■■□ 3.31
CMTM4-202ENST00000394106 BAZ2BQ9UIF8 2168 aaKnown RBP35.69■■■■□ 3.3
CMTM4-202ENST00000394106 A0A1W2PQ45 241 aaPredicted RBP35.69■■■■□ 3.3
CMTM4-202ENST00000394106 A0A1W2PQY0 241 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 KIF5BP33176 963 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 LIFRP42702 1097 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 GJA9P57773 515 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 KCNA10Q16322 511 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 PIBF1Q8WXW3 757 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 MAP3K14Q99558 947 aa35.69■■■■□ 3.3
CMTM4-202ENST00000394106 SMPD1P17405 629 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 ACLYP53396 1101 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 ADCK5Q3MIX3 580 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 IQSEC1Q6DN90 963 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 SYTL5Q8TDW5 730 aaPredicted RBP35.68■■■■□ 3.3
CMTM4-202ENST00000394106 MAF1Q9H063 256 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 PCDH10Q9P2E7 1040 aa35.68■■■■□ 3.3
CMTM4-202ENST00000394106 CFBP00751 764 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 RXRAP19793 462 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 PTGS1P23219 599 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 TRIM60Q495X7 471 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 GNASQ5JWF2 1037 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 TLK2Q86UE8 772 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 RAB11FIP4Q86YS3 637 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 COL20A1Q9P218 1284 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 RBM27Q9P2N5 1060 aaKnown RBP35.67■■■■□ 3.3
CMTM4-202ENST00000394106 SLC12A7Q9Y666 1083 aa35.67■■■■□ 3.3
CMTM4-202ENST00000394106 B4DLN1 442 aa35.66■■■■□ 3.3
CMTM4-202ENST00000394106 CST5P28325 142 aaPredicted RBP35.66■■■■□ 3.3
CMTM4-202ENST00000394106 MRPL12P52815 198 aaKnown RBP35.66■■■■□ 3.3
CMTM4-202ENST00000394106 KRT32Q14532 448 aa35.66■■■■□ 3.3
CMTM4-202ENST00000394106 TSGA10IPQ3SY00 556 aa35.66■■■■□ 3.3
CMTM4-202ENST00000394106 CCSAPQ6IQ19 270 aaPredicted RBP35.66■■■■□ 3.3
CMTM4-202ENST00000394106 TCEANC2Q96MN5 208 aa35.66■■■■□ 3.3
CMTM4-202ENST00000394106 TAAR1Q96RJ0 339 aa35.66■■■■□ 3.3
CMTM4-202ENST00000394106 GNEQ9Y223 722 aaKnown RBP35.66■■■■□ 3.3
CMTM4-202ENST00000394106 PNMA6FA0A0J9YX94 578 aa35.65■■■■□ 3.3
CMTM4-202ENST00000394106 MOXD2PA6NHM9 499 aa35.65■■■■□ 3.3
CMTM4-202ENST00000394106 SNX17Q15036 470 aa35.65■■■■□ 3.3
CMTM4-202ENST00000394106 TMEM63BQ5T3F8 832 aa35.65■■■■□ 3.3
CMTM4-202ENST00000394106 PCSK9Q8NBP7 692 aaKnown RBP35.65■■■■□ 3.3
CMTM4-202ENST00000394106 AP5M1Q9H0R1 490 aa35.65■■■■□ 3.3
CMTM4-202ENST00000394106 OPLAHO14841 1288 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 CALM1P0DP23 149 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 CALM2P0DP24 149 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 CALM3P0DP25 149 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 EDNRBP24530 442 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 BEX3Q00994 111 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 TRAF1Q13077 416 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 DHX32Q7L7V1 743 aaKnown RBP35.64■■■■□ 3.3
CMTM4-202ENST00000394106 STARD7Q9NQZ5 370 aa35.64■■■■□ 3.3
CMTM4-202ENST00000394106 DYNC1LI2O43237 492 aaPredicted RBP35.63■■■■□ 3.29
CMTM4-202ENST00000394106 REC8O95072 547 aa35.63■■■■□ 3.29
CMTM4-202ENST00000394106 ASGR1P07306 291 aa35.63■■■■□ 3.29
CMTM4-202ENST00000394106 NSUN6Q8TEA1 469 aaKnown RBP35.63■■■■□ 3.29
CMTM4-202ENST00000394106 RMDN3Q96TC7 470 aa35.63■■■■□ 3.29
CMTM4-202ENST00000394106 WDR11Q9BZH6 1224 aa35.63■■■■□ 3.29
CMTM4-202ENST00000394106 DNAH12Q6ZR08 3092 aa35.63■■■■□ 3.29
CMTM4-202ENST00000394106 CTAGE5O15320 804 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 PLEKHA8P1O95397 391 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 MAGEA10P43363 369 aaPredicted RBP35.62■■■■□ 3.29
CMTM4-202ENST00000394106 GNAQP50148 359 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 EXOSC10Q01780 885 aaKnown RBP35.62■■■■□ 3.29
CMTM4-202ENST00000394106 LZTS2Q9BRK4 669 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 SPZ1Q9BXG8 430 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 PRO3102Q9H379 93 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 PRKAG2Q9UGJ0 569 aa35.62■■■■□ 3.29
CMTM4-202ENST00000394106 HSPA4P34932 840 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 HSD17B4P51659 736 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 DUSP28Q4G0W2 176 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 C1orf53Q5VUE5 145 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 ARHGEF16Q5VV41 709 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 SYNE3Q6ZMZ3 975 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 SGMS1Q86VZ5 419 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 MICU3Q86XE3 530 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 VTI1AQ96AJ9 217 aa35.61■■■■□ 3.29
CMTM4-202ENST00000394106 RRP36Q96EU6 259 aaKnown RBP35.61■■■■□ 3.29
CMTM4-202ENST00000394106 FSCN1Q16658 493 aaKnown RBP35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms