RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 NFIBO00712 420 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 NMIQ13287 307 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 GRIN2CQ14957 1233 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 RRP12Q5JTH9 1297 aaKnown RBP20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 ZNF365Q70YC5 407 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 EEPD1Q7L9B9 569 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 DNERQ8NFT8 737 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 CLEC4DQ8WXI8 215 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 MPHOSPH6Q99547 160 aaKnown RBP20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 PPP1R12CQ9BZL4 782 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 OSBPL3Q9H4L5 887 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 MTMR7Q9Y216 660 aa20.57■□□□□ 0.88
SNRPA1-202ENST00000394082 NKRFO15226 690 aaKnown RBP eCLIP20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 CYP2C18P33260 490 aa20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 GPATCH4Q5T3I0 446 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 DGKHQ86XP1 1220 aa20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 RGS22Q8NE09 1264 aa20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 NOC4LQ9BVI4 516 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 PBX4Q9BYU1 374 aa20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 WDR11Q9BZH6 1224 aa20.56■□□□□ 0.88
SNRPA1-202ENST00000394082 B4DLN1 442 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 B4GALT4O60513 344 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 SUPT20HL2P0C7V6 817 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 EDNRBP24530 442 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 CPT1AP50416 773 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 MRPL12P52815 198 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 CCDC178Q5BJE1 867 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 RNF207Q6ZRF8 634 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 ESR2Q92731 530 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 PURBQ96QR8 312 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 GPCPD1Q9NPB8 672 aa20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-202ENST00000394082 FRMPD2Q68DX3 1309 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 FGBP02675 491 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 RAB30Q15771 203 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 TMEM63BQ5T3F8 832 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 RPUSD2Q8IZ73 545 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 LNPKQ9C0E8 428 aa20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 ALDH8A1Q9H2A2 487 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-202ENST00000394082 KPNA6O60684 536 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 PFKMP08237 780 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 ACRP10323 421 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 SDSP20132 328 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 HAND2P61296 217 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 RPS6P62753 249 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 PURAQ00577 322 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 BRDTQ58F21 947 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 SLC30A10Q6XR72 485 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 TBC1D10CQ8IV04 446 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 ANKS1AQ92625 1134 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 SYMPKQ92797 1274 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 TRPV6Q9H1D0 765 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 RAD50Q92878 1312 aa20.53■□□□□ 0.88
SNRPA1-202ENST00000394082 ZNF213O14771 459 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 PTGS1P23219 599 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 SCFD2Q8WU76 684 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 RILPL2Q969X0 211 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 WNT8AQ9H1J5 351 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 MSRAQ9UJ68 235 aa20.52■□□□□ 0.88
SNRPA1-202ENST00000394082 CHD7Q9P2D1 2997 aa20.52■□□□□ 0.87
SNRPA1-202ENST00000394082 A6NJR5 290 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 HIP1O00291 1037 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 CALML3P27482 149 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 PBX2P40425 430 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 PSMC6P62333 389 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 PDE4DQ08499 809 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 IQCA1Q86XH1 822 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 PLEKHM2Q8IWE5 1019 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 MTG1Q9BT17 334 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 CXXC1Q9P0U4 656 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 UMODL1Q5DID0 1318 aa20.51■□□□□ 0.87
SNRPA1-202ENST00000394082 GRXCR1A8MXD5 290 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 NUCB1Q02818 461 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 PTPN11Q06124 597 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 PPP2R5BQ15173 497 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 NFRKBQ6P4R8 1299 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 OR6J1Q8NGC5 347 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 GAS2L1Q99501 681 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 LAMA4Q16363 1823 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 SCN10AQ9Y5Y9 1956 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 MUC3AQ02505 3323 aa20.5■□□□□ 0.87
SNRPA1-202ENST00000394082 CCL23P55773 120 aa20.49■□□□□ 0.87
SNRPA1-202ENST00000394082 DSCC1Q9BVC3 393 aa20.49■□□□□ 0.87
SNRPA1-202ENST00000394082 TNKSO95271 1327 aa20.49■□□□□ 0.87
SNRPA1-202ENST00000394082 NEDD4P46934 1319 aa20.49■□□□□ 0.87
SNRPA1-202ENST00000394082 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 ASPRV1Q53RT3 343 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 OTOP2Q7RTS6 562 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 PNMA1Q8ND90 353 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 VWCEQ96DN2 955 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 ABCB11O95342 1321 aa20.48■□□□□ 0.87
SNRPA1-202ENST00000394082 RFC2P35250 354 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 TTLL4Q14679 1199 aa20.47■□□□□ 0.87
SNRPA1-202ENST00000394082 IWS1Q96ST2 819 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms