RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CCDC12Q8WUD4 166 aaPredicted RBP17.18■□□□□ 0.34
SUMO1-203ENST00000392246 WASF1Q92558 559 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 TBC1D5Q92609 795 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 APBA2Q99767 749 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
SUMO1-203ENST00000392246 CFBP00751 764 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 CALML3P27482 149 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 GHRHRQ02643 423 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 ZNF792Q3KQV3 632 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 FBXO46Q6PJ61 603 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-203ENST00000392246 NPLOC4Q8TAT6 608 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
SUMO1-203ENST00000392246 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 JAK2O60674 1132 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 POLR2MP0CAP2 368 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 HSD17B4P51659 736 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 SLC30A10Q6XR72 485 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 PXYLP1Q8TE99 480 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 CUL5Q93034 780 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 GLT8D2Q9H1C3 349 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 PTCH2Q9Y6C5 1203 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 SMCO2A6NFE2 343 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 ADCY3O60266 1144 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 DTNBO60941 627 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 XBP1P17861 261 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 HSCBQ8IWL3 235 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 CCDC148Q8NFR7 591 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-203ENST00000392246 MAML3Q96JK9 1138 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 VPS54Q9P1Q0 977 aa17.16■□□□□ 0.34
SUMO1-203ENST00000392246 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 PIK3CDO00329 1044 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 ZNF467Q7Z7K2 595 aaPredicted RBP17.15■□□□□ 0.34
SUMO1-203ENST00000392246 SLAIN1Q8ND83 568 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 AIFM3Q96NN9 605 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 ALG1Q9BT22 464 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 ZMYND12Q9H0C1 365 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
SUMO1-203ENST00000392246 ADD3Q9UEY8 706 aaKnown RBP17.15■□□□□ 0.34
SUMO1-203ENST00000392246 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
SUMO1-203ENST00000392246 LCTP09848 1927 aa17.14■□□□□ 0.34
SUMO1-203ENST00000392246 MEIS2O14770 477 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 GNA11P29992 359 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 HOXA13P31271 388 aaPredicted RBP17.14■□□□□ 0.33
SUMO1-203ENST00000392246 GRK4P32298 578 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 ADCY7P51828 1080 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 CUL4AQ13619 759 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 DNERQ8NFT8 737 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
SUMO1-203ENST00000392246 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
SUMO1-203ENST00000392246 SOWAHBA6NEL2 793 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 ELNP15502 786 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 NLRP5P59047 1200 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 CCL14Q16627 93 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 USP17L6PQ6QN14 398 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 MSL3Q8N5Y2 521 aaKnown RBP17.13■□□□□ 0.33
SUMO1-203ENST00000392246 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 TRIB2Q92519 343 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 FGD4Q96M96 766 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
SUMO1-203ENST00000392246 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 ASB14A6NK59 587 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
SUMO1-203ENST00000392246 SLC9C1Q4G0N8 1177 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
SUMO1-203ENST00000392246 TINF2Q9BSI4 451 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 FLRT1Q9NZU1 646 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 MCM3APO60318 1980 aa17.12■□□□□ 0.33
SUMO1-203ENST00000392246 B4DLN1 442 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 HMGCRP04035 888 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 ALDH5A1P51649 535 aaPredicted RBP17.11■□□□□ 0.33
SUMO1-203ENST00000392246 MFSD14CQ5VZR4 134 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
SUMO1-203ENST00000392246 SMC3Q9UQE7 1217 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 ASTN1O14525 1302 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 IGHA2P01877 340 aa17.11■□□□□ 0.33
SUMO1-203ENST00000392246 TRIM29Q14134 588 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms