RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CCDC84Q86UT8 332 aaPredicted RBP18.31■□□□□ 0.52
SNX9-201ENST00000392185 LARSQ9P2J5 1176 aaKnown RBP18.31■□□□□ 0.52
SNX9-201ENST00000392185 ODR4Q5SWX8 454 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 ADGRA1Q86SQ6 560 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 PAGE5Q96GU1 130 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 PYCARDQ9ULZ3 195 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 ZHX2Q9Y6X8 837 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 GCFC2P16383 781 aaKnown RBP18.3■□□□□ 0.52
SNX9-201ENST00000392185 DPEP1P16444 411 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 NCBP1Q09161 790 aaKnown RBP18.3■□□□□ 0.52
SNX9-201ENST00000392185 TRIM14Q14142 442 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
SNX9-201ENST00000392185 AK8Q96MA6 479 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 ARMCX3Q9UH62 379 aaPredicted RBP18.3■□□□□ 0.52
SNX9-201ENST00000392185 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 TMTC1Q8IUR5 882 aa18.3■□□□□ 0.52
SNX9-201ENST00000392185 RASA1P20936 1047 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 ADAM9Q13443 819 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 FMR1NBQ8N0W7 255 aaPredicted RBP18.29■□□□□ 0.52
SNX9-201ENST00000392185 CCDC127Q96BQ5 260 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 MTMR4Q9NYA4 1195 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 BCCIPQ9P287 314 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNX9-201ENST00000392185 GDAQ9Y2T3 454 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 COL4A3BPQ9Y5P4 624 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 STK24Q9Y6E0 443 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 RIOK3O14730 519 aaKnown RBP18.29■□□□□ 0.52
SNX9-201ENST00000392185 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 ADGRF4Q8IZF3 695 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 OR8K1Q8NGG5 319 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 TSC1Q92574 1164 aa18.29■□□□□ 0.52
SNX9-201ENST00000392185 FOXN1O15353 648 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 ZNRF3Q9ULT6 936 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 K7ENM7 598 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 XRCC5P13010 732 aaKnown RBP18.28■□□□□ 0.52
SNX9-201ENST00000392185 IFFO1Q0D2I5 559 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 UTP14CQ5TAP6 766 aaKnown RBP18.28■□□□□ 0.52
SNX9-201ENST00000392185 METTL13Q8N6R0 699 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 CACTINQ8WUQ7 758 aaKnown RBP18.28■□□□□ 0.52
SNX9-201ENST00000392185 NEBLO76041 1014 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 TNFAIP3P21580 790 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 RASA3Q14644 834 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 RESP18Q5W5W9 173 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 KRT26Q7Z3Y9 468 aa18.28■□□□□ 0.52
SNX9-201ENST00000392185 CKAP4Q07065 602 aaKnown RBP18.27■□□□□ 0.52
SNX9-201ENST00000392185 LRRC8AQ8IWT6 810 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 NUP58Q9BVL2 599 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 CARD6Q9BX69 1037 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 BARHL2Q9NY43 387 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 EXOC7Q9UPT5 735 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 ERICH4A6NGS2 130 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
SNX9-201ENST00000392185 USP14P54578 494 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 NFIAQ12857 509 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 ASIC2Q16515 512 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 KIAA0753Q2KHM9 967 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 SHC4Q6S5L8 630 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
SNX9-201ENST00000392185 RIOK1Q9BRS2 568 aaKnown RBP18.27■□□□□ 0.52
SNX9-201ENST00000392185 DISC1Q9NRI5 854 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 DNM2P50570 870 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 RCAN1P53805 252 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 WDR44Q5JSH3 913 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 SEPT14Q6ZU15 432 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 TUBGCP2Q9BSJ2 902 aa18.27■□□□□ 0.52
SNX9-201ENST00000392185 RAVER2Q9HCJ3 691 aaKnown RBP18.27■□□□□ 0.52
SNX9-201ENST00000392185 NWD1Q149M9 1564 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 TDP2O95551 362 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 ERCC5P28715 1186 aaPredicted RBP18.27■□□□□ 0.51
SNX9-201ENST00000392185 CUL4BQ13620 913 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 JAKMIP2Q96AA8 810 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 CNOT6LQ96LI5 555 aaKnown RBP18.27■□□□□ 0.51
SNX9-201ENST00000392185 ARFGAP3Q9NP61 516 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.51
SNX9-201ENST00000392185 SEPT7Q16181 437 aaKnown RBP18.26■□□□□ 0.51
SNX9-201ENST00000392185 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
SNX9-201ENST00000392185 LSM14BQ9BX40 385 aaKnown RBP18.26■□□□□ 0.51
SNX9-201ENST00000392185 DNAI2Q9GZS0 605 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 BHMT2Q9H2M3 363 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 GPR75-ASB3A0A0A6YYF3 556 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 RRP9O43818 475 aaKnown RBP18.26■□□□□ 0.51
SNX9-201ENST00000392185 SRGNP10124 158 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 CLEC17AQ6ZS10 378 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 TSPYL1Q9H0U9 437 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 PCDHA6Q9UN73 950 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 TRPC6Q9Y210 931 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 PCDHA8Q9Y5H6 950 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 TNNI1P19237 187 aa18.26■□□□□ 0.51
SNX9-201ENST00000392185 CTTNQ14247 550 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms