RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 TMOD4Q9NZQ9 345 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 CRB1P82279 1406 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 POLR2MP0CAP2 368 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 ARL1P40616 181 aaPredicted RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 KMT5BQ4FZB7 885 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 ANKRD42Q8N9B4 389 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 LAD1O00515 517 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 KRT15P19012 456 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 POLD1P28340 1107 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 ALDH3A1P30838 453 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 CUL4BQ13620 913 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 UBE2SQ16763 222 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 DENND2CQ68D51 928 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 SLC44A5Q8NCS7 719 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 FAM204AQ9H8W3 233 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 METTL14Q9HCE5 456 aaKnown RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 RABGAP1Q9Y3P9 1069 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 TULP4Q9NRJ4 1543 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.61
SGCB-201ENST00000381431 CLIC2O15247 247 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.61
SGCB-201ENST00000381431 SERPINB2P05120 415 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 FOXO4P98177 505 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 MAN2A1Q16706 1144 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 VTI1AQ96AJ9 217 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 RAB17Q9H0T7 212 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 FAM169AQ9Y6X4 670 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 SPATA31A3Q5VYP0 1347 aa18.83■□□□□ 0.61
SGCB-201ENST00000381431 ATP10DQ9P241 1426 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 GDF11O95390 407 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 TMTC3Q6ZXV5 915 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 LY9Q9HBG7 655 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 ABCC12Q96J65 1359 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 CLRN2A0PK11 232 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 CCDC151A5D8V7 595 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 RGS16O15492 202 aaPredicted RBP18.83■□□□□ 0.6
SGCB-201ENST00000381431 GAS8O95995 478 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 VSIG1Q86XK7 387 aa18.83■□□□□ 0.6
SGCB-201ENST00000381431 ENAHQ8N8S7 591 aaPredicted RBP18.83■□□□□ 0.6
SGCB-201ENST00000381431 KIF28PB7ZC32 967 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 TTLL1O95922 423 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 ATP5DP30049 168 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 EIF4A3P38919 411 aaKnown RBP18.82■□□□□ 0.6
SGCB-201ENST00000381431 ASPRV1Q53RT3 343 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 STAG1Q8WVM7 1258 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 MTMR3Q13615 1198 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 MAGEF1Q9HAY2 307 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 SWAP70Q9UH65 585 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 TRIM49BA6NDI0 452 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 FTCDO95954 541 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 PPM1EQ8WY54 764 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 MED4Q9NPJ6 270 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 ZBED6P86452 979 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 CCDC17Q96LX7 622 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 CEP63Q96MT8 703 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 TRIM7Q9C029 511 aa18.82■□□□□ 0.6
SGCB-201ENST00000381431 TOGARAM2Q6ZUX3 1019 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 SREK1Q8WXA9 508 aaKnown RBP18.81■□□□□ 0.6
SGCB-201ENST00000381431 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
SGCB-201ENST00000381431 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 CAPS2Q9BXY5 557 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 BSDC1Q9NW68 430 aaPredicted RBP18.81■□□□□ 0.6
SGCB-201ENST00000381431 FAM184BQ9ULE4 1060 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 LACTBP83111 547 aaPredicted RBP18.81■□□□□ 0.6
SGCB-201ENST00000381431 SHC4Q6S5L8 630 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 FAM71BQ8TC56 605 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 MFAP3LO75121 409 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 LRRN2O75325 713 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 TSGA10IPQ3SY00 556 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 LRCH2Q5VUJ6 765 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 CAPN12Q6ZSI9 719 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 EPC1Q9H2F5 836 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 EPB41L5Q9HCM4 733 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 ST7Q9NRC1 585 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 MRPL11Q9Y3B7 192 aaKnown RBP18.81■□□□□ 0.6
SGCB-201ENST00000381431 CHD1O14646 1710 aa18.81■□□□□ 0.6
SGCB-201ENST00000381431 MOCS3O95396 460 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 FERP16591 822 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 PDE6BP35913 854 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 CDK8P49336 464 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 LIG3P49916 1009 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 GLG1Q92896 1179 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 RPAP1Q9BWH6 1393 aaPredicted RBP18.8■□□□□ 0.6
SGCB-201ENST00000381431 TCP11X2Q5H9J9 407 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 DGKHQ86XP1 1220 aa18.8■□□□□ 0.6
SGCB-201ENST00000381431 NIM1KQ8IY84 436 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms