RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 FAM200AQ8TCP9 573 aa12.4□□□□□ -0.42
FAM239A-201ENST00000381108 LPAR1Q92633 364 aa12.4□□□□□ -0.42
FAM239A-201ENST00000381108 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
FAM239A-201ENST00000381108 GINM1Q9NU53 330 aa12.4□□□□□ -0.42
FAM239A-201ENST00000381108 EDIL3O43854 480 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 FLOT1O75955 427 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 EPHX2P34913 555 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 ZNF165P49910 485 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 HMGCS2P54868 508 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 RASSF8Q8NHQ8 419 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 UIMC1Q96RL1 719 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 P2RX7Q99572 595 aaKnown RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 GLT8D2Q9H1C3 349 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 LAD1O00515 517 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 ZNF500O60304 480 aaPredicted RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 CFBP00751 764 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
FAM239A-201ENST00000381108 TECP42680 631 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 TXKP42681 527 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 TERF1P54274 439 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 BACE1P56817 501 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 CALCRLQ16602 461 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 CBX8Q9HC52 389 aa12.39□□□□□ -0.43
FAM239A-201ENST00000381108 TXLNAP40222 546 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 AFMP43652 599 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 USP14P54578 494 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
FAM239A-201ENST00000381108 POSTNQ15063 836 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.38□□□□□ -0.43
FAM239A-201ENST00000381108 GJA10Q969M2 543 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
FAM239A-201ENST00000381108 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 ANO10Q9NW15 660 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
FAM239A-201ENST00000381108 USP25Q9UHP3 1055 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 OTOFQ9HC10 1997 aa12.38□□□□□ -0.43
FAM239A-201ENST00000381108 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PLA2G6O60733 806 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 USP2O75604 605 aaPredicted RBP12.37□□□□□ -0.43
FAM239A-201ENST00000381108 CASP1P29466 404 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PRPHP41219 470 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 AP3B2Q13367 1082 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 VGLL4Q14135 290 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
FAM239A-201ENST00000381108 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 STAMQ92783 540 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PLIN2Q99541 437 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
FAM239A-201ENST00000381108 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
FAM239A-201ENST00000381108 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
FAM239A-201ENST00000381108 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 UBA7P41226 1012 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 PPP4R3AQ6IN85 833 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 MOB2Q70IA6 237 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 WNK4Q96J92 1243 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 ZNF536O15090 1300 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 POTEMA6NI47 508 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 MARCH6O60337 910 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 TPM3P06753 285 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 TPM2P07951 284 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 STAT6P42226 847 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 TRAF1Q13077 416 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 IQUBQ8NA54 791 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 TUBE1Q9UJT0 475 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 PPP1R9AQ9ULJ8 1098 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 MRPL11Q9Y3B7 192 aaKnown RBP12.36□□□□□ -0.43
FAM239A-201ENST00000381108 SNCAIPQ9Y6H5 919 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 PARP14Q460N5 1801 aa12.36□□□□□ -0.43
FAM239A-201ENST00000381108 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms