RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CLIC4Q9Y696 253 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 PFKFB2O60825 505 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 GCNT3O95395 438 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 SLC16A10Q8TF71 515 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 CELF1Q92879 486 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 COBLO75128 1261 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 HOXC10Q9NYD6 342 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 ASNSP08243 561 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 UBE3CQ15386 1083 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 ZSCAN26Q16670 478 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
HIF3A-205ENST00000377670 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-205ENST00000377670 FANCCQ00597 558 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 C8orf74Q6P047 294 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 NOL3O60936 208 aaKnown RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 MAP2K2P36507 400 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 PPP1R2P41236 205 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CACNB3P54284 484 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 RNASE9P60153 205 aaKnown RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CNNM4Q6P4Q7 775 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 AMNQ9BXJ7 453 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 SLC8A2Q9UPR5 921 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 HGSO14964 777 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CHRNA5P30532 468 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 INF2Q27J81 1249 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 FEZ2Q9UHY8 353 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 PTPREP23469 700 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 LONRF3Q496Y0 759 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CCT6BQ92526 530 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 FBXO40Q9UH90 709 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 GOLGA6BA6NDN3 693 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 BMP3P12645 472 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 PSMC4P43686 418 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 STAT2P52630 851 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 RC3H1Q5TC82 1133 aaKnown RBP11.88□□□□□ -0.51
HIF3A-205ENST00000377670 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
HIF3A-205ENST00000377670 CETN3O15182 167 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 TTLL1O95922 423 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 SCARF1Q14162 830 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 GAS2L3Q86XJ1 694 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 MIPOL1Q8TD10 442 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 HESX1Q9UBX0 185 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 TMEM191BP0C7N4 346 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 C7orf31Q8N865 590 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 CRB1P82279 1406 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 SSH2Q76I76 1423 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 NRKQ7Z2Y5 1582 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 CRCPO75575 148 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 CYP2E1P05181 493 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 PRDX5P30044 214 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 PTPN21Q16825 1174 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 ANAPC4Q9UJX5 808 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 INO80B-WBP1J3KQ70 363 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 GBP1P32455 592 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 ARHGAP25P42331 645 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 MECOMQ03112 1051 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 SF3A3Q12874 501 aaKnown RBP eCLIP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 JAKMIP2Q96AA8 810 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 PGBD1Q96JS3 809 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-205ENST00000377670 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 NKIRAS1Q9NYS0 192 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 RGS12O14924 1447 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
HIF3A-205ENST00000377670 CIB2O75838 187 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 FOSP01100 380 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 ATP2A2P16615 1042 aaKnown RBP11.86□□□□□ -0.51
HIF3A-205ENST00000377670 TNFAIP3P21580 790 aa11.86□□□□□ -0.51
HIF3A-205ENST00000377670 KIF11P52732 1056 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms