RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 MAGEF1Q9HAY2 307 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 XDHP47989 1333 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 BBOF1Q8ND07 529 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 MAD1L1Q9Y6D9 718 aa20.76■□□□□ 0.91
TBC1D4-201ENST00000377625 MFAP3P55082 362 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 CNOT6LQ96LI5 555 aaKnown RBP20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 RPS6KC1Q96S38 1066 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 LOC102724428A0A0B4J2F2 783 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 H7C0C1 242 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 ATP5OP48047 213 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 COPB1P53618 953 aaKnown RBP20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 SIK1P57059 783 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 CCDC17Q96LX7 622 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 EPN1Q9Y6I3 576 aaPredicted RBP20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 CSRNP1Q96S65 589 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 PUS3Q9BZE2 481 aaKnown RBP20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 ARHGAP4P98171 946 aa20.75■□□□□ 0.91
TBC1D4-201ENST00000377625 PPEF1O14829 653 aaPredicted RBP20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 CRKLP46109 303 aaKnown RBP20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 GPATCH4Q5T3I0 446 aaKnown RBP20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 CTTNBP2Q8WZ74 1663 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ESYT2A0FGR8 921 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ATP1A2P50993 1020 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 BPIFB4P59827 614 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 MAP7D3Q8IWC1 876 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 FBXO18Q8NFZ0 1043 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ASPRV1Q53RT3 343 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 LRRC8AQ8IWT6 810 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 NT5C1BQ96P26 610 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 PASKQ96RG2 1323 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ZNF853P0CG23 659 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 UBXN2AP68543 259 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 EEF2KMTQ96G04 330 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 MRFAP1L1Q96HT8 127 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 NUB1Q9Y5A7 615 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 CLRN2A0PK11 232 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 LAD1O00515 517 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 PPP2R5AQ15172 486 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 NAA35Q5VZE5 725 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ANKRD13CQ8N6S4 541 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 ZNF577Q9BSK1 485 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 NBPF3Q9H094 633 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 COPRSQ9NQ92 184 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 PCDHB4Q9Y5E5 795 aa20.74■□□□□ 0.91
TBC1D4-201ENST00000377625 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 EHHADHQ08426 723 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 DPP9Q86TI2 863 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 ATP6V0A1Q93050 837 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 PCDHA4Q9UN74 947 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 GARSP41250 739 aaKnown RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 RASSF7Q02833 373 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 TUBGCP2Q9BSJ2 902 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 VCX3AQ9NNX9 186 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 TMEM2Q9UHN6 1383 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 EFCAB8A8MWE9 144 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 CIAO1O76071 339 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 ETF1P62495 437 aaKnown RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 RSPH3Q86UC2 560 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 SKA2Q8WVK7 121 aaPredicted RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 CDKL2Q92772 493 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 TRIM56Q9BRZ2 755 aaKnown RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 IPO11Q9UI26 975 aaKnown RBP20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 LEMD3Q9Y2U8 911 aa20.73■□□□□ 0.91
TBC1D4-201ENST00000377625 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 RGS12O14924 1447 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 SLC17A8Q8NDX2 589 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 CUEDC2Q9H467 287 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 BCL2L12Q9HB09 334 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 CPSF2Q9P2I0 782 aaKnown RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 ABCC2Q92887 1545 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 MYO1FO00160 1098 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 KRT3P12035 628 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 YWHAGP61981 247 aaKnown RBP eCLIP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 IRX4P78413 519 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 MESDQ14696 234 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 KSR1Q8IVT5 923 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 TACO1Q9BSH4 297 aaKnown RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 USH1CQ9Y6N9 552 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 XPOTO43592 962 aaKnown RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 LMNB1P20700 586 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 PHLDB3Q6NSJ2 640 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 BZW2Q9Y6E2 419 aaKnown RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 BLMP54132 1417 aaPredicted RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 COBLO75128 1261 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 TTLL1O95922 423 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 NR2F2P24468 414 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 PRPSAP1Q14558 356 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 KCTD1Q719H9 257 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 RFX6Q8HWS3 928 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 FOXP1Q9H334 677 aaPredicted RBP20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 AKT3Q9Y243 479 aa20.72■□□□□ 0.91
TBC1D4-201ENST00000377625 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
TBC1D4-201ENST00000377625 TMCO4Q5TGY1 634 aa20.71■□□□□ 0.91
TBC1D4-201ENST00000377625 UBE2Q2Q8WVN8 375 aa20.71■□□□□ 0.91
TBC1D4-201ENST00000377625 LSG1Q9H089 658 aaKnown RBP20.71■□□□□ 0.91
TBC1D4-201ENST00000377625 MUM1Q2TAK8 710 aa20.71■□□□□ 0.91
TBC1D4-201ENST00000377625 JADE1Q6IE81 842 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms