RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ZSCAN30Q86W11 494 aa14.6□□□□□ -0.07
TRIM40-206ENST00000376724 PLA2G4DQ86XP0 818 aa14.6□□□□□ -0.07
TRIM40-206ENST00000376724 ZNF830Q96NB3 372 aaPredicted RBP14.6□□□□□ -0.07
TRIM40-206ENST00000376724 MTMR9Q96QG7 549 aa14.6□□□□□ -0.07
TRIM40-206ENST00000376724 ANO3Q9BYT9 981 aa14.6□□□□□ -0.07
TRIM40-206ENST00000376724 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 HOXA13P31271 388 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 CLCN1P35523 988 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 TPM4P67936 248 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 NCAPHQ15003 741 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 SPATA20Q8TB22 786 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 GJA10Q969M2 543 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 AK8Q96MA6 479 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 GGA3Q9NZ52 723 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 DDNO94850 711 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 MSNP26038 577 aaKnown RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 LMOD1P29536 600 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 CUL4BQ13620 913 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 PPP4R3AQ6IN85 833 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
TRIM40-206ENST00000376724 TRIML1Q8N9V2 468 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 MTRQ99707 1265 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 SYT17Q9BSW7 474 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 CCSER1Q9C0I3 900 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 FEM1BQ9UK73 627 aa14.59□□□□□ -0.07
TRIM40-206ENST00000376724 SPDYE3A6NKU9 549 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 HIRAP54198 1017 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 MYL5Q02045 173 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 TMEM266Q2M3C6 531 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 NAALADL2Q58DX5 795 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 DCAF15Q66K64 600 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 SARM1Q6SZW1 724 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 ZKSCAN4Q969J2 545 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 NAP1L5Q96NT1 182 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 ATAD5Q96QE3 1844 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 POTEMA6NI47 508 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 OPLAHO14841 1288 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 IKBKBO14920 756 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 CFBP00751 764 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 PLCG1P19174 1290 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 AP3B2Q13367 1082 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 FAM160B2Q86V87 743 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 IGSF22Q8N9C0 903 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 MLKLQ8NB16 471 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 GSDMAQ96QA5 445 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 WRNIP1Q96S55 665 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 TTC12Q9H892 705 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 DACH1Q9UI36 760 aa14.58□□□□□ -0.08
TRIM40-206ENST00000376724 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRIM40-206ENST00000376724 MYH7BA7E2Y1 1941 aa14.57□□□□□ -0.08
TRIM40-206ENST00000376724 GOLGA6L6A8MZA4 724 aa14.57□□□□□ -0.08
TRIM40-206ENST00000376724 GTPBP6O43824 516 aaPredicted RBP14.57□□□□□ -0.08
TRIM40-206ENST00000376724 MTMR2Q13614 643 aa14.57□□□□□ -0.08
TRIM40-206ENST00000376724 TRMT44Q8IYL2 757 aaKnown RBP14.57□□□□□ -0.08
TRIM40-206ENST00000376724 SMYD4Q8IYR2 804 aaPredicted RBP14.57□□□□□ -0.08
TRIM40-206ENST00000376724 LRRC15Q8TF66 581 aa14.57□□□□□ -0.08
TRIM40-206ENST00000376724 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
TRIM40-206ENST00000376724 SRCAPQ6ZRS2 3230 aa14.57□□□□□ -0.08
TRIM40-206ENST00000376724 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 YBX3P16989 372 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 USP11P51784 963 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 FMR1Q06787 632 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 PRKG1Q13976 671 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 HSP90AA4PQ58FG1 418 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 KLHL10Q6JEL2 608 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 TBC1D5Q92609 795 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 HAS1Q92839 578 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 NRBP1Q9UHY1 535 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 ZKSCAN5Q9Y2L8 839 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 ATP1A3P13637 1013 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 SPP2Q13103 211 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 CALML4Q96GE6 196 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 MMTAG2Q9BU76 263 aaKnown RBP14.56□□□□□ -0.08
TRIM40-206ENST00000376724 RAB34Q9BZG1 259 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 KIAA1683Q9H0B3 1180 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 FANCLQ9NW38 375 aa14.56□□□□□ -0.08
TRIM40-206ENST00000376724 SMCHD1A6NHR9 2005 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 PLA2G6O60733 806 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
TRIM40-206ENST00000376724 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
TRIM40-206ENST00000376724 TRAF1Q13077 416 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 PRR16Q569H4 304 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 LDHDQ86WU2 507 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 SCYL3Q8IZE3 742 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 CDK5RAP3Q96JB5 506 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 HSD3B7Q9H2F3 369 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 PICK1Q9NRD5 415 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 IFNKQ9P0W0 207 aa14.55□□□□□ -0.08
TRIM40-206ENST00000376724 PCDHA12Q9UN75 941 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms