RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CCDC194A0A1B0GVG4 234 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 NFIBO00712 420 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 HSD17B4P51659 736 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 HTRA3P83110 453 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 USP17L6PQ6QN14 398 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 NCAPG2Q86XI2 1143 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 BIN2Q9UBW5 565 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-202ENST00000376237 ADGRA2Q96PE1 1338 aa26.23■■□□□ 1.79
HLA-C-202ENST00000376237 COL11A1P12107 1806 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-202ENST00000376237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.22■■□□□ 1.79
HLA-C-202ENST00000376237 ERCC3P19447 782 aa26.21■■□□□ 1.79
HLA-C-202ENST00000376237 UBE2SQ16763 222 aa26.21■■□□□ 1.79
HLA-C-202ENST00000376237 JAKMIP3Q5VZ66 844 aa26.21■■□□□ 1.79
HLA-C-202ENST00000376237 SPDYE3A6NKU9 549 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 ADAMTS3O15072 1205 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 PEX10O60683 326 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 BCRP11274 1271 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 NONOQ15233 471 aaKnown RBP eCLIP26.2■■□□□ 1.79
HLA-C-202ENST00000376237 RILPL1Q5EBL4 403 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 MYSM1Q5VVJ2 828 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 ATL3Q6DD88 541 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 C17orf99Q6UX52 265 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 RNF207Q6ZRF8 634 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 RASGRP4Q8TDF6 673 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 TBC1D5Q92609 795 aa26.2■■□□□ 1.79
HLA-C-202ENST00000376237 TNPO1Q92973 898 aaKnown RBP26.2■■□□□ 1.79
HLA-C-202ENST00000376237 TRAPPC10P48553 1259 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 CRHR2Q13324 411 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 NSMFQ6X4W1 530 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 PIK3AP1Q6ZUJ8 805 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 CCAR1Q8IX12 1150 aaKnown RBP26.19■■□□□ 1.78
HLA-C-202ENST00000376237 NOL7Q9UMY1 257 aaKnown RBP26.19■■□□□ 1.78
HLA-C-202ENST00000376237 PFASO15067 1338 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 HOXA13P31271 388 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-202ENST00000376237 RPS6P62753 249 aaKnown RBP26.19■■□□□ 1.78
HLA-C-202ENST00000376237 ZNF396Q96N95 335 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-202ENST00000376237 EHMT1Q9H9B1 1298 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 TMEM260Q9NX78 707 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 CPA4Q9UI42 421 aa26.19■■□□□ 1.78
HLA-C-202ENST00000376237 ANKRD35Q8N283 1001 aa26.18■■□□□ 1.78
HLA-C-202ENST00000376237 CFHR5Q9BXR6 569 aa26.18■■□□□ 1.78
HLA-C-202ENST00000376237 A1CFQ9NQ94 594 aaKnown RBP26.18■■□□□ 1.78
HLA-C-202ENST00000376237 CYP39A1Q9NYL5 469 aa26.18■■□□□ 1.78
HLA-C-202ENST00000376237 BAATQ14032 418 aaPredicted RBP26.17■■□□□ 1.78
HLA-C-202ENST00000376237 EARS2Q5JPH6 523 aaKnown RBP26.17■■□□□ 1.78
HLA-C-202ENST00000376237 SYTL5Q8TDW5 730 aaPredicted RBP26.17■■□□□ 1.78
HLA-C-202ENST00000376237 ANO3Q9BYT9 981 aa26.17■■□□□ 1.78
HLA-C-202ENST00000376237 STRNO43815 780 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 MAPK4P31152 587 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 CLEC17AQ6ZS10 378 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 FCHSD1Q86WN1 690 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 PORCNQ9H237 461 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 CFAP45Q9UL16 551 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 SMCHD1A6NHR9 2005 aa26.16■■□□□ 1.78
HLA-C-202ENST00000376237 FCER1AP12319 257 aa26.15■■□□□ 1.78
HLA-C-202ENST00000376237 KCTD2Q14681 263 aa26.15■■□□□ 1.78
HLA-C-202ENST00000376237 FAM173BQ6P4H8 233 aa26.15■■□□□ 1.78
HLA-C-202ENST00000376237 TBCKQ8TEA7 893 aa26.15■■□□□ 1.78
HLA-C-202ENST00000376237 EFCC1Q9HA90 598 aa26.15■■□□□ 1.78
HLA-C-202ENST00000376237 NOM1Q5C9Z4 860 aaKnown RBP26.14■■□□□ 1.78
HLA-C-202ENST00000376237 WDR78Q5VTH9 848 aa26.14■■□□□ 1.78
HLA-C-202ENST00000376237 SLC30A10Q6XR72 485 aa26.14■■□□□ 1.78
HLA-C-202ENST00000376237 ABRAQ8N0Z2 381 aa26.14■■□□□ 1.78
HLA-C-202ENST00000376237 SREBF1P36956 1147 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 USP11P51784 963 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 KRT85P78386 507 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 DNM1Q05193 864 aaKnown RBP26.14■■□□□ 1.77
HLA-C-202ENST00000376237 INF2Q27J81 1249 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 FOXD4L6Q3SYB3 417 aaPredicted RBP26.14■■□□□ 1.77
HLA-C-202ENST00000376237 FOXD4L3Q6VB84 417 aaPredicted RBP26.14■■□□□ 1.77
HLA-C-202ENST00000376237 NEK8Q86SG6 692 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 MMP19Q99542 508 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 NAP1L4Q99733 375 aaKnown RBP26.14■■□□□ 1.77
HLA-C-202ENST00000376237 IVNS1ABPQ9Y6Y0 642 aa26.14■■□□□ 1.77
HLA-C-202ENST00000376237 FAM205CA6NFA0 338 aa26.13■■□□□ 1.77
HLA-C-202ENST00000376237 PGBD1Q96JS3 809 aa26.13■■□□□ 1.77
HLA-C-202ENST00000376237 GBP4Q96PP9 640 aa26.13■■□□□ 1.77
HLA-C-202ENST00000376237 COL20A1Q9P218 1284 aa26.13■■□□□ 1.77
HLA-C-202ENST00000376237 THSD7BQ9C0I4 1608 aa26.12■■□□□ 1.77
HLA-C-202ENST00000376237 TOB1P50616 345 aaPredicted RBP26.12■■□□□ 1.77
HLA-C-202ENST00000376237 DNERQ8NFT8 737 aa26.12■■□□□ 1.77
HLA-C-202ENST00000376237 RNF186Q9NXI6 227 aa26.12■■□□□ 1.77
HLA-C-202ENST00000376237 POTEB2H3BUK9 544 aa26.11■■□□□ 1.77
HLA-C-202ENST00000376237 ORC2Q13416 577 aaPredicted RBP26.11■■□□□ 1.77
HLA-C-202ENST00000376237 CRYGNQ8WXF5 182 aa26.11■■□□□ 1.77
HLA-C-202ENST00000376237 RMDN3Q96TC7 470 aa26.11■■□□□ 1.77
HLA-C-202ENST00000376237 POLR3EQ9NVU0 708 aa26.11■■□□□ 1.77
HLA-C-202ENST00000376237 BAG4O95429 457 aaKnown RBP26.1■■□□□ 1.77
HLA-C-202ENST00000376237 ARHGAP4P98171 946 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 TTC38Q5R3I4 469 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 GPR142Q7Z601 462 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 PLEKHH3Q7Z736 793 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 NSUN6Q8TEA1 469 aaKnown RBP26.1■■□□□ 1.77
HLA-C-202ENST00000376237 TAAR1Q96RJ0 339 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 USP28Q96RU2 1077 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 SCAND2PQ9GZW5 306 aaPredicted RBP26.1■■□□□ 1.77
HLA-C-202ENST00000376237 SAGE1Q9NXZ1 904 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 RTEL1Q9NZ71 1219 aa26.1■■□□□ 1.77
HLA-C-202ENST00000376237 ADD3Q9UEY8 706 aaKnown RBP26.1■■□□□ 1.77
HLA-C-202ENST00000376237 FRMPD4Q14CM0 1322 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms