RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 ZSCAN29Q8IWY8 852 aaPredicted RBP13.85□□□□□ -0.19
TNFSF13B-201ENST00000375887 CCDC102AQ96A19 550 aa13.85□□□□□ -0.19
TNFSF13B-201ENST00000375887 NYXQ9GZU5 481 aa13.85□□□□□ -0.19
TNFSF13B-201ENST00000375887 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
TNFSF13B-201ENST00000375887 BIN2Q9UBW5 565 aaPredicted RBP13.85□□□□□ -0.19
TNFSF13B-201ENST00000375887 KDM4FA0A1W2PPD8 638 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 EDIL3O43854 480 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 NONOQ15233 471 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 TPTE2Q6XPS3 522 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 ZNF662Q6ZS27 426 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 TBCKQ8TEA7 893 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 NOC3LQ8WTT2 800 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 AK8Q96MA6 479 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 EIF3CLB5ME19 914 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 KRT86O43790 486 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 EIF3JO75822 258 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 CDK8P49336 464 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 PPP4CP60510 307 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 FOXR1Q6PIV2 292 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 GSPT2Q8IYD1 628 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 WDR66Q8TBY9 1149 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 PIGSQ96S52 555 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 EIF3CQ99613 913 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 LCMT1Q9UIC8 334 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 CNTNAP4Q9C0A0 1308 aa13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 ZC3H4Q9UPT8 1303 aaKnown RBP13.84□□□□□ -0.19
TNFSF13B-201ENST00000375887 GNPATO15228 680 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 SYF2O95926 243 aaKnown RBP13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 CYLC1P35663 651 aaPredicted RBP13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 MRPS25P82663 173 aaKnown RBP13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 NEK8Q86SG6 692 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 RETREG2Q8NC44 543 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 ERGIC2Q96RQ1 377 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 EYA3Q99504 573 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 GBP3Q9H0R5 595 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 CUEDC2Q9H467 287 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.19
TNFSF13B-201ENST00000375887 MYMKA6NI61 221 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 ACTN2P35609 894 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 TXKP42681 527 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 GRB10Q13322 594 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 KRT25Q7Z3Z0 450 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 CCDC170Q8IYT3 715 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 GLIS3Q8NEA6 775 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 NUP58Q9BVL2 599 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 ZNHIT6Q9NWK9 470 aaKnown RBP13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 ARHGAP20Q9P2F6 1191 aa13.83□□□□□ -0.2
TNFSF13B-201ENST00000375887 BICDL2A1A5D9 508 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 ZPR1O75312 459 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 BAG3O95817 575 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 TUBBP07437 444 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 CENPPQ6IPU0 288 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 SNED1Q8TER0 1413 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 SLURP2P0DP57 97 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 ATP2B2Q01814 1243 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 DYMQ7RTS9 669 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 GJA10Q969M2 543 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 PNMA5Q96PV4 448 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 MAGEF1Q9HAY2 307 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
TNFSF13B-201ENST00000375887 SLC37A4O43826 429 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 IDEP14735 1019 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 BTDP43251 543 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 C2orf54Q08AI8 447 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 C2CD5Q86YS7 1000 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 FAM71BQ8TC56 605 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 HDAC7Q8WUI4 952 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 CCDC42Q96M95 316 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 TSPYL1Q9H0U9 437 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 HPCAL4Q9UM19 191 aa13.81□□□□□ -0.2
TNFSF13B-201ENST00000375887 PLAGL2Q9UPG8 496 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms