RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 TSGA10IPQ3SY00 556 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 CYP2J2P51589 502 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 ATF2P15336 505 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 GYG1P46976 350 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 MAGEA9P43362 315 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 TCP11X2Q5H9J9 407 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 GBP5Q96PP8 586 aa23.17■■□□□ 1.3
TGFBR1-202ENST00000374994 ARID5BQ14865 1188 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 FAM178BQ8IXR5 827 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 SMYD4Q8IYR2 804 aaPredicted RBP23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 IQGAP3Q86VI3 1631 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 CFBP00751 764 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 GCKP35557 465 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 PDE6CP51160 858 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 KRT31Q15323 416 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 CHURC1Q8WUH1 139 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 HARSP12081 509 aaKnown RBP23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 IL9RQ01113 521 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 GRAMD1CQ8IYS0 662 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 NR5A1Q13285 461 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 CUL1Q13616 776 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 NCAPD2Q15021 1401 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 LTKP29376 864 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 CLTAP09496 248 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 PALM2Q8IXS6 379 aa23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 CCNL1Q9UK58 526 aaPredicted RBP23.16■■□□□ 1.3
TGFBR1-202ENST00000374994 GAP43P17677 238 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 KMT5BQ4FZB7 885 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 SP4Q02446 784 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 MIER3Q7Z3K6 550 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 ZNF354CQ86Y25 554 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 MB21D1Q8N884 522 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 TEKT1Q969V4 418 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 PCDHB6Q9Y5E3 794 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 MYO1CO00159 1063 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 AFPP02771 609 aaKnown RBP23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 CCDC144BQ3MJ40 725 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 PRR16Q569H4 304 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 OTUD6AQ7L8S5 288 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 SERPING1P05155 500 aa23.15■■□□□ 1.3
TGFBR1-202ENST00000374994 NR1D1P20393 614 aa23.14■■□□□ 1.3
TGFBR1-202ENST00000374994 LRRC63Q05C16 580 aa23.14■■□□□ 1.3
TGFBR1-202ENST00000374994 ASPRV1Q53RT3 343 aa23.14■■□□□ 1.3
TGFBR1-202ENST00000374994 TACO1Q9BSH4 297 aaKnown RBP23.14■■□□□ 1.3
TGFBR1-202ENST00000374994 PNPLA6Q8IY17 1366 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 EIF4A3P38919 411 aaKnown RBP23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 C2orf54Q08AI8 447 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 SEMA3FQ13275 785 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 SLMAPQ14BN4 828 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 SLC17A8Q8NDX2 589 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 C1orf112Q9NSG2 853 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 PCDHA13Q9Y5I0 950 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 NR2F2P24468 414 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 BPIFB4P59827 614 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 TET3O43151 1660 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 USH1GQ495M9 461 aa23.14■■□□□ 1.29
TGFBR1-202ENST00000374994 GPATCH4Q5T3I0 446 aaKnown RBP23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 RSAD2Q8WXG1 361 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 TRIM11Q96F44 468 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 CD19P15391 556 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 HADHQ16836 314 aaKnown RBP23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 LRRC8CQ8TDW0 803 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 STAG1Q8WVM7 1258 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 ZSWIM5Q9P217 1185 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 KIF11P52732 1056 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 PPP1R2P3Q6NXS1 205 aa23.13■■□□□ 1.29
TGFBR1-202ENST00000374994 CCDC188H7C350 402 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 MAGOHBQ96A72 148 aaKnown RBP23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 ZMYND10O75800 440 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 MAEAQ7L5Y9 396 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 KRT26Q7Z3Y9 468 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 H7C1W4 665 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 NDST4Q9H3R1 872 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 MFSD14BQ5SR56 506 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 RDH13Q8NBN7 331 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 GOLPH3LQ9H4A5 285 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 TNNI1P19237 187 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
TGFBR1-202ENST00000374994 KIF1BO60333 1816 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 MMS22LQ6ZRQ5 1243 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 ANKRD35Q8N283 1001 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 RILPQ96NA2 401 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 ZBED4O75132 1171 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 PPARDQ03181 441 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 MAP7Q14244 749 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 TTC19Q6DKK2 380 aaPredicted RBP23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 DHX9Q08211 1270 aaKnown RBP23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 JDP2Q8WYK2 163 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 DDX23Q9BUQ8 820 aaKnown RBP23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 ARHGEF18Q6ZSZ5 1173 aa23.11■■□□□ 1.29
TGFBR1-202ENST00000374994 ODF2LQ9ULJ1 636 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms