RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 USP17L17D6RBQ6 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L19D6RCP7 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L20D6RJB6 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 STX10O60499 249 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 EPB41P11171 864 aaKnown RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PTGS1P23219 599 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L24Q0WX57 530 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PPP2R5BQ15173 497 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ANO1Q5XXA6 986 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 AGBL3Q8NEM8 1001 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 PHLPP1O60346 1717 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 EP400Q96L91 3159 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 NEURL4Q96JN8 1562 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ADM5C9JUS6 153 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ADCY3O60266 1144 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 GYS1P13807 737 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 BRD3Q15059 726 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 WDR44Q5JSH3 913 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 AKNAD1Q5T1N1 836 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 SESTD1Q86VW0 696 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC25Q86WR0 208 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 LZTFL1Q9NQ48 299 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 BABAM1Q9NWV8 329 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 TROVE2P10155 538 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 HMGCS2P54868 508 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 AAK1Q2M2I8 961 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 DHX58Q96C10 678 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC51Q96ER9 411 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 FRMD4BQ9Y2L6 1034 aa6.92□□□□□ -1.3
PTPN3-202ENST00000374541 USP42Q9H9J4 1324 aaKnown RBP6.92□□□□□ -1.3
PTPN3-202ENST00000374541 ANKRD20A3Q5VUR7 823 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 LEO1Q8WVC0 666 aaPredicted RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ARHGEF2Q92974 986 aaKnown RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 RNF34Q969K3 372 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC17Q96LX7 622 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SYNDIG1Q9H7V2 258 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 EXOC7Q9UPT5 735 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SOS1Q07889 1333 aaPredicted RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 PREX1Q8TCU6 1659 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ZMYM4Q5VZL5 1548 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 E7EVH7 732 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ARHGAP6O43182 974 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 KCNQ3O43525 872 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SPOPO43791 374 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 AP1ARQ63HQ0 302 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 NLRP10Q86W26 655 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 EIF2AQ9BY44 585 aaKnown RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 IFNKQ9P0W0 207 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ADGRB2O60241 1585 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ARHGAP31Q2M1Z3 1444 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA8QA0A0J9YX86 632 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA8OA6NCC3 632 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 TTC36A6NLP5 189 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA8NF8WBI6 632 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GJC1P36383 396 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ZNF131P52739 623 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 TIMM10P62072 90 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ZNF827Q17R98 1081 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 TMEM199Q8N511 208 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 KCNG1Q9UIX4 513 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 PCDHA1Q9Y5I3 950 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 RBM8AQ9Y5S9 174 aaKnown RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 IQGAP1P46940 1657 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 HOXB7P09629 217 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 MCM7P33993 719 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 FAM49AQ9H0Q0 323 aaPredicted RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 RAB17Q9H0T7 212 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 ZMYND8Q9ULU4 1186 aaPredicted RBP6.91□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC169A6NNP5 214 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 TMEM110-MUSTN1A8MSY1 372 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 KRT17Q04695 432 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 GNASQ5JWF2 1037 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SBNO2Q9Y2G9 1366 aa6.91□□□□□ -1.3
PTPN3-202ENST00000374541 SMIM23A6NLE4 172 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 HIP1RO75146 1068 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 TNFAIP3P21580 790 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 KARSQ15046 597 aaKnown RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 ERO1BQ86YB8 467 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 MYRIPQ8NFW9 859 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 KIF1BO60333 1816 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA8KD6RF30 607 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 CALUO43852 315 aaPredicted RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 POLR2MP0CAP2 368 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 EIF4A1P60842 406 aaKnown RBP6.9□□□□□ -1.3
PTPN3-202ENST00000374541 PRR16Q569H4 304 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 DTHD1Q6ZMT9 781 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 SV2BQ7L1I2 683 aa6.9□□□□□ -1.3
PTPN3-202ENST00000374541 MYOCDQ8IZQ8 938 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms