RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 GYPCP04921 128 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 RDXP35241 583 aaKnown RBP12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 RBM28Q9NW13 759 aaKnown RBP12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 NDUFAB1O14561 156 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 ERVK-24P63145 666 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
RPRD1B-201ENST00000373433 MYO1FO00160 1098 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 MORC3Q14149 939 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 RUFY1Q96T51 708 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 KRT9P35527 623 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 ANTXR2P58335 489 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 CERKLQ49MI3 558 aaPredicted RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC47Q96A33 483 aaKnown RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 SUGT1Q9Y2Z0 365 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 NUP98P52948 1817 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 TCRBV5S4A2TA0A5A2 114 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 ZEB2O60315 1214 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 MYBL2P10244 700 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 GSCP56915 257 aaPredicted RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
RPRD1B-201ENST00000373433 BTBD18B2RXH4 712 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 IL1R1P14778 569 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 CDK8P49336 464 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 TGFB2P61812 414 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 MDM2Q00987 491 aaPredicted RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 RIOK1Q9BRS2 568 aaKnown RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 DEXIO95424 95 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 ATP1A1P05023 1023 aaKnown RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 DONSONQ9NYP3 566 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 MYH8P13535 1937 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 ARHGAP25P42331 645 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■□ 22.1
RPRD1B-201ENST00000373433 TNFAIP1Q13829 316 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 RNF187Q5TA31 235 aaPredicted RBP12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 STAMQ92783 540 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 CTAGE1Q96RT6 745 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 JADE2Q9NQC1 790 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 ABHD10Q9NUJ1 306 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 KCNJ14Q9UNX9 436 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 ZMYM6O95789 1325 aa12.43□□□□□ -0.42
RPRD1B-201ENST00000373433 NMT2O60551 498 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 GOLGA8HP0CJ92 632 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 LIFRP42702 1097 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 ATP1A2P50993 1020 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 NAPAP54920 295 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 KIAA1328Q86T90 577 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 CHP1Q99653 195 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 AMPD2Q01433 879 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 PDCLQ13371 301 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 RRP36Q96EU6 259 aaKnown RBP12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 PRM3Q9NNZ6 103 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 CTNND2Q9UQB3 1225 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 MYO3BQ8WXR4 1341 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 EIF3HO15372 352 aaKnown RBP eCLIP12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 SLC1A4P43007 532 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 PPARDQ03181 441 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 C2orf54Q08AI8 447 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
RPRD1B-201ENST00000373433 CD44P16070 742 aaKnown RBP12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 GRIK5Q16478 980 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 C12orf60Q5U649 245 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 CEP131Q9UPN4 1083 aa12.41□□□□□ -0.42
RPRD1B-201ENST00000373433 GPR75-ASB3A0A0A6YYF3 556 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms