RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 PRDX5P30044 214 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-202ENST00000373387 PPP1R2P41236 205 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 ORC2Q13416 577 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-202ENST00000373387 TXNRD1Q16881 649 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 MTMR9Q96QG7 549 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 BLOC1S4Q9NUP1 217 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 JRKLQ9Y4A0 524 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 SIPA1L1O43166 1804 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 FCER1AP12319 257 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 MAGEA9P43362 315 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 MAPK8IP2Q13387 824 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-202ENST00000373387 MAP9Q49MG5 647 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 HGSNATQ68CP4 663 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 LRRC55Q6ZSA7 311 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 RIN2Q8WYP3 895 aaPredicted RBP8.35□□□□□ -1.07
GARNL3-202ENST00000373387 CAVIN3Q969G5 261 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
GARNL3-202ENST00000373387 TSGA10Q9BZW7 698 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 FAM184BQ9ULE4 1060 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 EXOC5O00471 708 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 TM4SF1P30408 202 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 STIM1Q13586 685 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 INF2Q27J81 1249 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 CAVIN4Q5BKX8 364 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 LEKR1Q6ZMV7 388 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 CSGALNACT2Q8N6G5 542 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 AFAP1L1Q8TED9 768 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 TRIM47Q96LD4 638 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
GARNL3-202ENST00000373387 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ATP6V1AP38606 617 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 C2orf54Q08AI8 447 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SF3B2Q13435 895 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 HAUS3Q68CZ6 603 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 GSPT2Q8IYD1 628 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 PNMA5Q96PV4 448 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ZNF335Q9H4Z2 1342 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ZBTB48P10074 688 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SMARCA1P28370 1054 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SKOR1P84550 965 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 GRB10Q13322 594 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ZCWPW2Q504Y3 356 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 AMOTL1Q8IY63 956 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 TRIM34Q9BYJ4 488 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 LRWD1Q9UFC0 647 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 DMGDHQ9UI17 866 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 PLIN4Q96Q06 1357 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 PPP4CP60510 307 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 DPY19L2P1Q6NXN4 242 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 KRT26Q7Z3Y9 468 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 CABP7Q86V35 215 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 TXNRD3Q86VQ6 643 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ZC3H3Q8IXZ2 948 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 TRIM58Q8NG06 486 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 SECISBP2LQ93073 1101 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
GARNL3-202ENST00000373387 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
GARNL3-202ENST00000373387 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-202ENST00000373387 ESYT2A0FGR8 921 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 OR52Z1P0C646 297 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 HOXA7P31268 230 aaPredicted RBP8.33□□□□□ -1.08
GARNL3-202ENST00000373387 TFAP4Q01664 338 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 VWA3BQ502W6 1294 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 SPATA4Q8NEY3 305 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 RRP36Q96EU6 259 aaKnown RBP8.33□□□□□ -1.08
GARNL3-202ENST00000373387 LRRC1Q9BTT6 524 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 TLR10Q9BXR5 811 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 TSPY2A6NKD2 308 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 PHACTR2O75167 634 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 MYBP10242 640 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 RASA1P20936 1047 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 GNAQP50148 359 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
GARNL3-202ENST00000373387 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 C10orf67Q8IYJ2 551 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
GARNL3-202ENST00000373387 CAPZA3Q96KX2 299 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 OSBPL9Q96SU4 736 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 EDEM3Q9BZQ6 932 aa8.33□□□□□ -1.08
GARNL3-202ENST00000373387 KAT14Q9H8E8 782 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms