RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 STIM2Q9P246 746 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 ZNF609O15014 1411 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 BPIFB4P59827 614 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 PICALMQ13492 652 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 PNOCQ13519 176 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 ZNF512BQ96KM6 892 aaPredicted RBP11.69□□□□□ -0.54
PGK1-201ENST00000373316 TAB2Q9NYJ8 693 aa11.69□□□□□ -0.54
PGK1-201ENST00000373316 ZBED4O75132 1171 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 STK10O94804 968 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 PUS7LQ9H0K6 701 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.68□□□□□ -0.54
PGK1-201ENST00000373316 LMNB1P20700 586 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 STAT1P42224 750 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 CHRNDQ07001 517 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 NFIXQ14938 502 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 INTS8Q75QN2 995 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 STAG1Q8WVM7 1258 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 BTAF1O14981 1849 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 XDHP47989 1333 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 SPOPO43791 374 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 OAS2P29728 719 aaKnown RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 INPP5BP32019 993 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 SLC1A4P43007 532 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 DNA2P51530 1060 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 NDUFA8P51970 172 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 ATP11AP98196 1134 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 CCDC6Q16204 474 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 HERC4Q5GLZ8 1057 aaPredicted RBP11.68□□□□□ -0.54
PGK1-201ENST00000373316 ZNF365Q70YC5 407 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 TXNRD3Q86VQ6 643 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 PBKQ96KB5 322 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
PGK1-201ENST00000373316 P4HA1P13674 534 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 TXKP42681 527 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 DGKHQ86XP1 1220 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 UBLCP1Q8WVY7 318 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 NWD2Q9ULI1 1742 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 NDUFAB1O14561 156 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 SLC8A3P57103 927 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 LRRC63Q05C16 580 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 PEX26Q7Z412 305 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 AFAP1L2Q8N4X5 818 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 CYP2E1P05181 493 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 TNFAIP1Q13829 316 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 DCAF17Q5H9S7 520 aaPredicted RBP11.67□□□□□ -0.54
PGK1-201ENST00000373316 CCHCR1Q8TD31 782 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 PHKBQ93100 1093 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 HOMER3Q9NSC5 361 aa11.67□□□□□ -0.54
PGK1-201ENST00000373316 IRX4P78413 519 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 MAN2A1Q16706 1144 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 MAK16Q9BXY0 300 aaKnown RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 RXRAP19793 462 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 ALS2CLQ60I27 953 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 ANO9A1A5B4 782 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 CIB2O75838 187 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 ANXA13P27216 316 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 EPHB4P54760 987 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 EN1Q05925 392 aaPredicted RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.66□□□□□ -0.542e-65■□□□□ 8.4
PGK1-201ENST00000373316 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 EDEM3Q9BZQ6 932 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 EXOC4Q96A65 974 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
PGK1-201ENST00000373316 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
PGK1-201ENST00000373316 ZBED6P86452 979 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms