RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 NFIXQ14938 502 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 DNAJC7Q99615 494 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 MYH6P13533 1939 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 ORC4O43929 436 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 PICALMQ13492 652 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 KCTD16Q68DU8 428 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 SELENOOQ9BVL4 669 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 PACSIN2Q9UNF0 486 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 NUP98P52948 1817 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 TULP2O00295 520 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 SYF2O95926 243 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 RASSF7Q02833 373 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 CCDC181Q5TID7 509 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
LRIF1-201ENST00000369763 LRRC47Q8N1G4 583 aaKnown RBP12.14□□□□□ -0.47
LRIF1-201ENST00000369763 STXBP3O00186 592 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 SRGNP10124 158 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 KIAA0895Q8NCT3 520 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 RASSF4Q9H2L5 321 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 SEMA6BQ9H3T3 888 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 ZSCAN5CA6NGD5 496 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 PSMD14O00487 310 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 TDP2O95551 362 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 TNNI2P48788 182 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 CT47A1Q5JQC4 288 aaPredicted RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 C12orf60Q5U649 245 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 LRRC31Q6UY01 552 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 CACNA2D4Q7Z3S7 1137 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 SRLQ86TD4 932 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 GNPATO15228 680 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 IFT81Q8WYA0 676 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 BARHL2Q9NY43 387 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 ARHGAP20Q9P2F6 1191 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
LRIF1-201ENST00000369763 DDX60Q8IY21 1712 aaKnown RBP12.13□□□□□ -0.47
LRIF1-201ENST00000369763 CHD4Q14839 1912 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 LRRC53A6NM62 1247 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 MIIPQ5JXC2 388 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRIF1-201ENST00000369763 ACBD3Q9H3P7 528 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 CCNE1P24864 410 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
LRIF1-201ENST00000369763 UBE2SQ16763 222 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 EYA3Q99504 573 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 SEC63Q9UGP8 760 aaKnown RBP12.12□□□□□ -0.47
LRIF1-201ENST00000369763 MYH3P11055 1940 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 KIF11P52732 1056 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 ZBED6P86452 979 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
LRIF1-201ENST00000369763 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 PCDHA13Q9Y5I0 950 aa12.12□□□□□ -0.47
LRIF1-201ENST00000369763 MYMKA6NI61 221 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 SLC37A4O43826 429 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 FTCDO95954 541 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 FGRP09769 529 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 FECHP22830 423 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 SLC16A2P36021 539 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 GUCY2FP51841 1108 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 NEK8Q86SG6 692 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
LRIF1-201ENST00000369763 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms