RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 PNKPQ96T60 521 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 ATP8A2Q9NTI2 1148 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 IMPACTQ9P2X3 320 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 ZRSR2Q15696 482 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 SCAND2PQ9GZW5 306 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 NEFHP12036 1026 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 IQCB1Q15051 598 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 PRMT6Q96LA8 375 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-202ENST00000368912 SLC16A2P36021 539 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 CDK8P49336 464 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 DDX4Q9NQI0 724 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 PAX3P23760 479 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 MAP3K9P80192 1104 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 LRRC23Q53EV4 343 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 LY9Q9HBG7 655 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 NLRP5P59047 1200 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 VSNL1P62760 191 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 TMEM87BQ96K49 555 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 BAIAP2L1Q9UHR4 511 aa17.09■□□□□ 0.33
SEMA6C-202ENST00000368912 ZNF202O95125 648 aa17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 PLCG2P16885 1265 aa17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 GPR162Q16538 588 aa17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 TRMT1LQ7Z2T5 733 aaKnown RBP17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 PNMA1Q8ND90 353 aa17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 HDAC9Q9UKV0 1011 aa17.08■□□□□ 0.33
SEMA6C-202ENST00000368912 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 LRRIQ3A6PVS8 624 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 PARP9Q8IXQ6 854 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 CSRNP1Q96S65 589 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 MYO1EQ12965 1108 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 RASGRP4Q8TDF6 673 aa17.08■□□□□ 0.32
SEMA6C-202ENST00000368912 FLT1P17948 1338 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 RTFDC1Q9BY42 306 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 MTFR1LQ9H019 292 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 OSBPL5Q9H0X9 879 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 SLC40A1Q9NP59 571 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 MARCH6O60337 910 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 SERPINC1P01008 464 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 IFT88Q13099 833 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 NR5A1Q13285 461 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 KRT40Q6A162 431 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 MAF1Q9H063 256 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 SLC5A9Q2M3M2 681 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
SEMA6C-202ENST00000368912 SMIM24O75264 130 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 STIM1Q13586 685 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 KCTD1Q719H9 257 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 NOC3LQ8WTT2 800 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 HOOK1Q9UJC3 728 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 PAPPAQ13219 1627 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 AKR1B1P15121 316 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 SLC8A1P32418 973 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 WLSQ5T9L3 541 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 CCDC50Q8IVM0 306 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 UPF1Q92900 1129 aaKnown RBP eCLIP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 CABP5Q9NP86 173 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 LZTFL1Q9NQ48 299 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 ZNF274Q96GC6 653 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
SEMA6C-202ENST00000368912 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 BIN1O00499 593 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 PPARDQ03181 441 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 FILIP1LQ4L180 1135 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 TRIM42Q8IWZ5 723 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 ATRIPQ8WXE1 791 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 YDJCA8MPS7 323 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 MYO1BO43795 1136 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CCDC121Q6ZUS5 278 aa17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 HNRNPLLQ8WVV9 542 aaKnown RBP17.05■□□□□ 0.32
SEMA6C-202ENST00000368912 CEP95Q96GE4 821 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms