RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 RIOX1Q9H6W3 641 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
CD48-202ENST00000368046 FAM184BQ9ULE4 1060 aa11.47□□□□□ -0.57
CD48-202ENST00000368046 KIAA0100Q14667 2235 aaKnown RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 ABCB11O95342 1321 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 PTPDC1A2A3K4 754 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 NFIBO00712 420 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 SH2B2O14492 632 aaPredicted RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 ZBTB5O15062 677 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 HMGB1P09429 215 aaKnown RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 SMARCA1P28370 1054 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 HSPA4P34932 840 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 TRAF1Q13077 416 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 COL9A3Q14050 684 aaPredicted RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 GSE1Q14687 1217 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 QRICH1Q2TAL8 776 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 ADCK5Q3MIX3 580 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 USH1GQ495M9 461 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 NFXL1Q6ZNB6 911 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 RNF207Q6ZRF8 634 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 ARMCX2Q7L311 632 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 AMNQ9BXJ7 453 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 C11orf49Q9H6J7 331 aa11.46□□□□□ -0.57
CD48-202ENST00000368046 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 MRPL11Q9Y3B7 192 aaKnown RBP11.46□□□□□ -0.57
CD48-202ENST00000368046 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.58
CD48-202ENST00000368046 LAMA4Q16363 1823 aa11.46□□□□□ -0.58
CD48-202ENST00000368046 ZNF236Q9UL36 1845 aa11.46□□□□□ -0.58
CD48-202ENST00000368046 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.58
CD48-202ENST00000368046 LOC102724159A0A0B4J2E5 919 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 DDAH1O94760 285 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 CALM1P0DP23 149 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 CALM2P0DP24 149 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 CALM3P0DP25 149 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 RARBP10826 455 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 COL6A1P12109 1028 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 AKR1A1P14550 325 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 CALML3P27482 149 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 KIF5BP33176 963 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 GNAQP50148 359 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 RPS6P62753 249 aaKnown RBP11.45□□□□□ -0.58
CD48-202ENST00000368046 PWP2Q15269 919 aaKnown RBP11.45□□□□□ -0.58
CD48-202ENST00000368046 ANO1Q5XXA6 986 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 SGMS1Q86VZ5 419 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 CTCFLQ8NI51 663 aaPredicted RBP11.45□□□□□ -0.58
CD48-202ENST00000368046 MORC4Q8TE76 937 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
CD48-202ENST00000368046 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 LZTS2Q9BRK4 669 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 SLC12A7Q9Y666 1083 aa11.45□□□□□ -0.58
CD48-202ENST00000368046 TNRC18O15417 2968 aaPredicted RBP11.45□□□□□ -0.58
CD48-202ENST00000368046 PNMA6FA0A0J9YX94 578 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 DNM1LO00429 736 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 CYTH3O43739 400 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 PSMA5P28066 241 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
CD48-202ENST00000368046 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
CD48-202ENST00000368046 SAMD3Q8N6K7 520 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 FANCBQ8NB91 859 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 DNERQ8NFT8 737 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
CD48-202ENST00000368046 PIGSQ96S52 555 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 USP26Q9BXU7 913 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 LRRC2Q9BYS8 371 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 MAP3K20Q9NYL2 800 aaKnown RBP11.44□□□□□ -0.58
CD48-202ENST00000368046 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
CD48-202ENST00000368046 PCDHA1Q9Y5I3 950 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 SNX14Q9Y5W7 946 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
CD48-202ENST00000368046 ASTN1O14525 1302 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 B4DLN1 442 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 EVI5O60447 810 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 DUSP11O75319 330 aaKnown RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 MRPL12P52815 198 aaKnown RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 LRRC41Q15345 812 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 CCDC144BQ3MJ40 725 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 IQSEC1Q6DN90 963 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 RNF180Q86T96 592 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 HOMER1Q86YM7 354 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 MYL10Q9BUA6 226 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
CD48-202ENST00000368046 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
CD48-202ENST00000368046 KBTBD13C9JR72 458 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 PPP1R11O60927 126 aaPredicted RBP11.42□□□□□ -0.58
CD48-202ENST00000368046 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 TAPT1Q6NXT6 567 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 BLOC1S2Q6QNY1 142 aa11.42□□□□□ -0.58
CD48-202ENST00000368046 SLC30A10Q6XR72 485 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms