RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
SF3B5-201ENST00000367569 TKFCQ3LXA3 575 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 SH3RF1Q7Z6J0 888 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 TMEM87BQ96K49 555 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 PIGSQ96S52 555 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 PDLIM7Q9NR12 457 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
SF3B5-201ENST00000367569 CYTH3O43739 400 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 DDAH1O94760 285 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 AKR1A1P14550 325 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 PTGS1P23219 599 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 TLE2Q04725 743 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 EEPD1Q7L9B9 569 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 RNF180Q86T96 592 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
SF3B5-201ENST00000367569 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
SF3B5-201ENST00000367569 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 MTMR10Q9NXD2 777 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
SF3B5-201ENST00000367569 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 hCG_1642624A0A1W2PR95 340 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 TRIM43BA6NCK2 446 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
SF3B5-201ENST00000367569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.03■□□□□ 0.32
SF3B5-201ENST00000367569 FBXO11Q86XK2 927 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 BADQ92934 168 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 TRIM43Q96BQ3 446 aaPredicted RBP17.03■□□□□ 0.32
SF3B5-201ENST00000367569 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.03■□□□□ 0.32
SF3B5-201ENST00000367569 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
SF3B5-201ENST00000367569 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
SF3B5-201ENST00000367569 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 ADCY6O43306 1168 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 ITGB8P26012 769 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
SF3B5-201ENST00000367569 APOBRQ0VD83 1088 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 KRT32Q14532 448 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 SHHQ15465 462 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 C9orf50Q5SZB4 431 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 RNF207Q6ZRF8 634 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
SF3B5-201ENST00000367569 FBXO16Q8IX29 292 aaPredicted RBP17.02■□□□□ 0.32
SF3B5-201ENST00000367569 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 KCNB2Q92953 911 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 FAM184BQ9ULE4 1060 aa17.02■□□□□ 0.32
SF3B5-201ENST00000367569 ABCB11O95342 1321 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
SF3B5-201ENST00000367569 IRX5P78411 483 aaPredicted RBP17.01■□□□□ 0.31
SF3B5-201ENST00000367569 FGD1P98174 961 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 TSGA10IPQ3SY00 556 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 APOA5Q6Q788 366 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 BLOC1S2Q6QNY1 142 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 Q6ZUG5 572 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
SF3B5-201ENST00000367569 KLHDC9Q8NEP7 349 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
SF3B5-201ENST00000367569 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 STXBP5LQ9Y2K9 1186 aa17.01■□□□□ 0.31
SF3B5-201ENST00000367569 MYADML2A6NDP7 307 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 GOLGA8BA8MQT2 603 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 ZBTB5O15062 677 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 RPS6KB1P23443 525 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 LIFRP42702 1097 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 ALDH5A1P51649 535 aaPredicted RBP17■□□□□ 0.31
SF3B5-201ENST00000367569 ACVR2BQ13705 512 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 CCSAPQ6IQ19 270 aaPredicted RBP17■□□□□ 0.31
SF3B5-201ENST00000367569 SRBD1Q8N5C6 995 aaKnown RBP17■□□□□ 0.31
SF3B5-201ENST00000367569 BRF1Q92994 677 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
SF3B5-201ENST00000367569 TSEN34Q9BSV6 310 aaKnown RBP17■□□□□ 0.31
SF3B5-201ENST00000367569 AMNQ9BXJ7 453 aa17■□□□□ 0.31
SF3B5-201ENST00000367569 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
SF3B5-201ENST00000367569 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 OPLAHO14841 1288 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 PQBP1O60828 265 aaKnown RBP16.99■□□□□ 0.31
SF3B5-201ENST00000367569 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
SF3B5-201ENST00000367569 SEC24BO95487 1268 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 CFBP00751 764 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 CLTBP09497 229 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
SF3B5-201ENST00000367569 KIF5BP33176 963 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 ACLYP53396 1101 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 KCNA10Q16322 511 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 TMEM63BQ5T3F8 832 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 MTMR8Q96EF0 704 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 KATNBL1Q9H079 304 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 KIAA1217Q5T5P2 1943 aa16.99■□□□□ 0.31
SF3B5-201ENST00000367569 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
SF3B5-201ENST00000367569 KIAA0355O15063 1070 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms