RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RASA1P20936 1047 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 LRRC41Q15345 812 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 DNAJC7Q99615 494 aa13.76□□□□□ -0.21
PTPN7-202ENST00000367279 A0A1W2PQC6 194 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 AKR1B10O60218 316 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 SRGNP10124 158 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 FECHP22830 423 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 GNA11P29992 359 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 CDK8P49336 464 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 GSTO1P78417 241 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 AMPD3Q01432 767 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 AMPD2Q01433 879 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 HNRNPLLQ8WVV9 542 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 F8W031 263 aaPredicted RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 TNNI2P48788 182 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 TRAPPC11Q7Z392 1133 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 LDHCP07864 332 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 CXCR5P32302 372 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 ZNF804AQ7Z570 1209 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 LRRC47Q8N1G4 583 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 SECISBP2LQ93073 1101 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 EXOC4Q96A65 974 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 PLEKHA4Q9H4M7 779 aa13.75□□□□□ -0.21
PTPN7-202ENST00000367279 THRAP3Q9Y2W1 955 aaKnown RBP13.75□□□□□ -0.21
PTPN7-202ENST00000367279 POTEMA6NI47 508 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 USP17L5A8MUK1 530 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 ZBED6P86452 979 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 RAD51AP2Q09MP3 1159 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CNNM4Q6P4Q7 775 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 EHBP1Q8NDI1 1231 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 NOC3LQ8WTT2 800 aaKnown RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 GJA10Q969M2 543 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 NUP58Q9BVL2 599 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 MLXIPQ9HAP2 919 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 TBC1D7Q9P0N9 293 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 PALM3A6NDB9 673 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 PSMD14O00487 310 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 UFL1O94874 794 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 RFC4P35249 363 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 TUBB4BP68371 445 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CALCRLQ16602 461 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CRACR2AQ9BSW2 395 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CWC15Q9P013 229 aaKnown RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CCNL1Q9UK58 526 aaPredicted RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 M0R2N6 131 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 USP14P54578 494 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 TDRD12Q587J7 1177 aaKnown RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 CACNA2D4Q7Z3S7 1137 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
PTPN7-202ENST00000367279 ZHX3Q9H4I2 956 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
PTPN7-202ENST00000367279 LAD1O00515 517 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 USO1O60763 962 aaKnown RBP13.73□□□□□ -0.21
PTPN7-202ENST00000367279 MOCS3O95396 460 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 GALNT17Q6IS24 598 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 TDP2O95551 362 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 MAP9Q49MG5 647 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 CCDC181Q5TID7 509 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 CCDC70Q6NSX1 233 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 C10orf67Q8IYJ2 551 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
PTPN7-202ENST00000367279 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
PTPN7-202ENST00000367279 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 NLRC4Q9NPP4 1024 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 SMARCAL1Q9NZC9 954 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 SPATA31A5Q5VU36 1347 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 SPATA31A7Q8IWB4 1347 aa13.73□□□□□ -0.21
PTPN7-202ENST00000367279 MYL1P05976 194 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 ARID5AQ03989 594 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 AMIGO3Q86WK7 504 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 AK8Q96MA6 479 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 C8orf37Q96NL8 207 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 FLT1P17948 1338 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 RASSF10A6NK89 507 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
PTPN7-202ENST00000367279 STRCQ7RTU9 1775 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 CASZ1Q86V15 1759 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 MYMKA6NI61 221 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
PTPN7-202ENST00000367279 EPHB6O15197 1021 aa13.72□□□□□ -0.21
PTPN7-202ENST00000367279 RNF40O75150 1001 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms