RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 IFIH1Q9BYX4 1025 aaKnown RBP15.14■□□□□ 0.01
PRKN-205ENST00000366897 SALL4Q9UJQ4 1053 aa15.14■□□□□ 0.01
PRKN-205ENST00000366897 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
PRKN-205ENST00000366897 SNX12Q9UMY4 172 aa15.14■□□□□ 0.01
PRKN-205ENST00000366897 BUB1O43683 1085 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 LONP1P36776 959 aaKnown RBP15.13■□□□□ 0.01
PRKN-205ENST00000366897 RNASE9P60153 205 aaKnown RBP15.13■□□□□ 0.01
PRKN-205ENST00000366897 ASIC1P78348 528 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 PPP2R5BQ15173 497 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 SPA17Q15506 151 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 EHBP1Q8NDI1 1231 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 SPATA4Q8NEY3 305 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 MTA3Q9BTC8 594 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 THAP9Q9H5L6 903 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 SHANK3Q9BYB0 1731 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 CCDC194A0A1B0GVG4 234 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 TSPY2A6NKD2 308 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 KRT14P02533 472 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 PLCG1P19174 1290 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 VAV2P52735 878 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 ZBED6P86452 979 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 EFCAB13Q8IY85 973 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 PROM2Q8N271 834 aa15.13■□□□□ 0.01
PRKN-205ENST00000366897 GRIN2DO15399 1336 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 EBAG9O00559 213 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 ZEB2O60315 1214 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 KLRK1P26718 216 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 EIF4A3P38919 411 aaKnown RBP15.12■□□□□ 0.01
PRKN-205ENST00000366897 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
PRKN-205ENST00000366897 TTMPQ5BVD1 217 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 HEATR3Q7Z4Q2 680 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 CCDC155Q8N6L0 562 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 GIMAP8Q8ND71 665 aaPredicted RBP15.12■□□□□ 0.01
PRKN-205ENST00000366897 DEF6Q9H4E7 631 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 SLC39A2Q9NP94 309 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
PRKN-205ENST00000366897 MYH3P11055 1940 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 SHOX2O60902 331 aaPredicted RBP15.12■□□□□ 0.01
PRKN-205ENST00000366897 DDAH1O94760 285 aa15.12■□□□□ 0.01
PRKN-205ENST00000366897 ERLIN2O94905 339 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 CALM1P0DP23 149 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 CALM2P0DP24 149 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 CALM3P0DP25 149 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 NAP1L1P55209 391 aaKnown RBP15.11■□□□□ 0.01
PRKN-205ENST00000366897 CCDC181Q5TID7 509 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 P2RX5Q93086 422 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 OSBPL9Q96SU4 736 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
PRKN-205ENST00000366897 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 A0A087WUV0 522 aaPredicted RBP15.11■□□□□ 0.01
PRKN-205ENST00000366897 AKR1B10O60218 316 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 TRAPPC10P48553 1259 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 APBA1Q02410 837 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
PRKN-205ENST00000366897 RPGRIP1Q96KN7 1286 aa15.11■□□□□ 0.01
PRKN-205ENST00000366897 GOLGB1Q14789 3259 aaKnown RBP15.11■□□□□ 0.01
PRKN-205ENST00000366897 KIF11P52732 1056 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 PPFIA1Q13136 1202 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 SLC35G1Q2M3R5 365 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 CCDC70Q6NSX1 233 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 PURBQ96QR8 312 aaKnown RBP15.1■□□□□ 0.01
PRKN-205ENST00000366897 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 COL4A1P02462 1669 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 ANO9A1A5B4 782 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 EIF3HO15372 352 aaKnown RBP eCLIP15.1■□□□□ 0.01
PRKN-205ENST00000366897 TACC1O75410 805 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 FAM153BP0C7A2 387 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 R3HDM1Q15032 1099 aaKnown RBP15.1■□□□□ 0.01
PRKN-205ENST00000366897 TRADDQ15628 312 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 FAM153CQ494X1 144 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 CCDC152Q4G0S7 254 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 ARL6IP4Q66PJ3 421 aaKnown RBP15.1■□□□□ 0.01
PRKN-205ENST00000366897 HAUS3Q68CZ6 603 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 RCSD1Q6JBY9 416 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 RRAGAQ7L523 313 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 IFT81Q8WYA0 676 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 DYNLL2Q96FJ2 89 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 SH2D4AQ9H788 454 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 KBTBD4Q9NVX7 518 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 FAM153AQ9UHL3 310 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
PRKN-205ENST00000366897 GFPT1Q06210 699 aaPredicted RBP15.1■□□□□ 0.01
PRKN-205ENST00000366897 PTPROQ16827 1216 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 RUFY1Q96T51 708 aa15.1■□□□□ 0.01
PRKN-205ENST00000366897 PAPPAQ13219 1627 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 USP17L8P0C7I0 530 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 CCNE1P24864 410 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 RASSF7Q02833 373 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 LETM2Q2VYF4 491 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 DYMQ7RTS9 669 aa15.09■□□□□ 0.01
PRKN-205ENST00000366897 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms