RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 MTMR4Q9NYA4 1195 aa9.6□□□□□ -0.87
MRPL55-211ENST00000366738 FAM184BQ9ULE4 1060 aa9.6□□□□□ -0.87
MRPL55-211ENST00000366738 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
MRPL55-211ENST00000366738 EPOPA6NHQ4 379 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 B4E1Z4 1266 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 TLR3O15455 904 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 FGBP02675 491 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 MCCP23508 829 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 CCL23P55773 120 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 CPXCR1Q8N123 301 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 CHMP4CQ96CF2 233 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 TEX13BQ9BXU2 312 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 MTIF3Q9H2K0 278 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 HIPK3Q9H422 1215 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 UPF2Q9HAU5 1272 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 RAVER2Q9HCJ3 691 aaKnown RBP9.59□□□□□ -0.87
MRPL55-211ENST00000366738 PLIN4Q96Q06 1357 aa9.59□□□□□ -0.87
MRPL55-211ENST00000366738 ZBBXA8MT70 800 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 ATP2A1O14983 1001 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 CTAGE5O15320 804 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 EIF5BO60841 1220 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 CD4P01730 458 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 FGRP09769 529 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 SLC4A3P48751 1232 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 ANTXR2P58335 489 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 BEX3Q00994 111 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 RNF20Q5VTR2 975 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 MAMDC4Q6UXC1 1216 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 CYB5R4Q7L1T6 521 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 PCSK9Q8NBP7 692 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 NEDD1Q8NHV4 660 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 IL17RAQ96F46 866 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 TCEANC2Q96MN5 208 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 UPF3BQ9BZI7 483 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 KATNBL1Q9H079 304 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 UPF3AQ9H1J1 476 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 WNT8AQ9H1J5 351 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 SLC38A10Q9HBR0 1119 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 IL17RBQ9NRM6 502 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 TOMM22Q9NS69 142 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 MTCH2Q9Y6C9 303 aa9.58□□□□□ -0.88
MRPL55-211ENST00000366738 DDX49Q9Y6V7 483 aaKnown RBP9.58□□□□□ -0.88
MRPL55-211ENST00000366738 ASTN1O14525 1302 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 ZNF536O15090 1300 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 TLL1O43897 1013 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 ORC4O43929 436 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 NMT2O60551 498 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 GPR37L1O60883 481 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 KDM4AO75164 1064 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CA3P07451 260 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CASTP20810 708 aaKnown RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 PTGS1P23219 599 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 GJA9P57773 515 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 TFAP4Q01664 338 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CNTN2Q02246 1040 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 ACVR2BQ13705 512 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CCDC144BQ3MJ40 725 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 GNASQ5JWF2 1037 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CXCL17Q6UXB2 119 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 MFSD6Q6ZSS7 791 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 MSL3Q8N5Y2 521 aaKnown RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 GMCL1P1Q8NEA9 526 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 VWCEQ96DN2 955 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 SCLYQ96I15 445 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 NOC4LQ9BVI4 516 aaKnown RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 LRRC2Q9BYS8 371 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 SPC25Q9HBM1 224 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 PCDHA11Q9Y5I1 949 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 SLC4A7Q9Y6M7 1214 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 WDFY4Q6ZS81 3184 aa9.57□□□□□ -0.88
MRPL55-211ENST00000366738 COL4A4P53420 1690 aaPredicted RBP9.57□□□□□ -0.88
MRPL55-211ENST00000366738 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 RANBP6O60518 1105 aaKnown RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 ZBED4O75132 1171 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 TTLL1O95922 423 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 SLC3A2P08195 630 aaKnown RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 BMP3P12645 472 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 ATP2A2P16615 1042 aaKnown RBP9.56□□□□□ -0.88
MRPL55-211ENST00000366738 COPB2P35606 906 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 ANAPC15P60006 121 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 SNAP25P60880 206 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 PDE4BQ07343 736 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 TTLL4Q14679 1199 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 SLFN13Q68D06 897 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 NCOA7Q8NI08 942 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 DDX11Q96FC9 970 aa9.56□□□□□ -0.88
MRPL55-211ENST00000366738 AGBL1Q96MI9 1066 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms