RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 DEPDC7Q96QD5 511 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 MMP19Q99542 508 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 IER2Q9BTL4 223 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 SPATA9Q9BWV2 254 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 EPB41L4BQ9H329 900 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 ZNF552Q9H707 407 aaPredicted RBP4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 TNFRSF12AQ9NP84 129 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 PDLIM7Q9NR12 457 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 SNTG2Q9NY99 539 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 GULP1Q9UBP9 304 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 RWDD3Q9Y3V2 267 aa4.98□□□□□ -1.61
RNU4-48P-201ENST00000365559 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 IQCA1LA6NCM1 817 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 PRODHO43272 600 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 ADCY3O60266 1144 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 DLX3O60479 287 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 FARP2O94887 1054 aaPredicted RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 TXKP42681 527 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 CORO7P57737 925 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 SSRP1Q08945 709 aaKnown RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 HSP90AA2PQ14568 343 aaPredicted RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 SLC35F1Q5T1Q4 408 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 SOGA3Q5TF21 947 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 BICRALQ6AI39 1079 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 PPIL6Q8IXY8 311 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 LRRC47Q8N1G4 583 aaKnown RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 DPF3Q92784 378 aa4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 AARSD1Q9BTE6 412 aaKnown RBP4.97□□□□□ -1.61
RNU4-48P-201ENST00000365559 NUDT19A8MXV4 375 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 MEFVO15553 781 aaPredicted RBP4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 NPHS1O60500 1241 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 CPP00450 1065 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 FGFR1P11362 822 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 PABPC1P11940 636 aaKnown RBP4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 LCP1P13796 627 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 YBX1P67809 324 aaKnown RBP4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 ACBD5Q5T8D3 534 aaPredicted RBP4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 LRP10Q7Z4F1 713 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 FBXO15Q8NCQ5 510 aaPredicted RBP4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 KCTD13Q8WZ19 329 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 UBXN4Q92575 508 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 DIO2Q92813 273 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 OSBP2Q969R2 916 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 MTA3Q9BTC8 594 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 MCOLN1Q9GZU1 580 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 OSBPL2Q9H1P3 480 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 KLHL14Q9P2G3 628 aa4.96□□□□□ -1.62
RNU4-48P-201ENST00000365559 TRAV20A0A0B4J274 112 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 A0A1W2PQJ5 194 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 FUCA1P04066 466 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 MPOP05164 745 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 DBHP09172 617 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 FAM153BP0C7A2 387 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 GLI4P10075 376 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 VIPR1P32241 457 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 MAP4K2Q12851 820 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 BMS1Q14692 1282 aaKnown RBP4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 RAB3GAP1Q15042 981 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 TESK1Q15569 626 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 FOXB2Q5VYV0 432 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 E4F1Q66K89 784 aaPredicted RBP4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 IQCEQ6IPM2 695 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 NSMFQ6X4W1 530 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 RPTNQ6XPR3 784 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 SYDE1Q6ZW31 735 aaPredicted RBP4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 LZTR1Q8N653 840 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 RCBTB1Q8NDN9 531 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 MKL1Q969V6 931 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 FAM84AQ96KN4 292 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 DNAJC7Q99615 494 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 RXFP1Q9HBX9 757 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 BTG4Q9NY30 223 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 FBXL7Q9UJT9 491 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 HCFC2Q9Y5Z7 792 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 KDM2BQ8NHM5 1336 aa4.95□□□□□ -1.62
RNU4-48P-201ENST00000365559 BLACEA4D250 179 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 SRGAP3O43295 1099 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 PEX10O60683 326 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 KRT1P04264 644 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 CYBBP04839 570 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 C8AP07357 584 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 LTBRP36941 435 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 IFRD2Q12894 506 aaPredicted RBP4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 KCNAB2Q13303 367 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 CBX2Q14781 532 aaPredicted RBP4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 ZNF124Q15973 351 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 NTRK3Q16288 839 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 PLEKHN1Q494U1 663 aaPredicted RBP4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 PAQR3Q6TCH7 311 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 USP53Q70EK8 1073 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 TEX2Q8IWB9 1127 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 ZBTB38Q8NAP3 1195 aaPredicted RBP4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 PLEKHO2Q8TD55 490 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 SLC26A8Q96RN1 970 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 SGPP1Q9BX95 441 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 LNPKQ9C0E8 428 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 MARCH2Q9P0N8 246 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
RNU4-48P-201ENST00000365559 TEX51A0A1B0GUA7 166 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms