RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 NSMFQ6X4W1 530 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 DAGLBQ8NCG7 672 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNX6-201ENST00000362031 C6orf50Q9HD87 102 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
SNX6-201ENST00000362031 KIF3AQ9Y496 699 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 THSD7BQ9C0I4 1608 aa12.35□□□□□ -0.43
SNX6-201ENST00000362031 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 XBP1P17861 261 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 TOB1P50616 345 aaPredicted RBP12.34□□□□□ -0.43
SNX6-201ENST00000362031 HSD17B4P51659 736 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
SNX6-201ENST00000362031 FAM110CQ1W6H9 321 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 PIK3AP1Q6ZUJ8 805 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 FCHSD1Q86WN1 690 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 CUL5Q93034 780 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
SNX6-201ENST00000362031 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 CYP39A1Q9NYL5 469 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 LCTP09848 1927 aa12.34□□□□□ -0.43
SNX6-201ENST00000362031 PGK2P07205 417 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 UBXN2AP68543 259 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 CNTN2Q02246 1040 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.43
SNX6-201ENST00000362031 SYTL5Q8TDW5 730 aaPredicted RBP12.33□□□□□ -0.43
SNX6-201ENST00000362031 CCDC12Q8WUD4 166 aaPredicted RBP12.33□□□□□ -0.43
SNX6-201ENST00000362031 FOXP1Q9H334 677 aaPredicted RBP12.33□□□□□ -0.43
SNX6-201ENST00000362031 ACAD9Q9H845 621 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 TSKSQ9UJT2 592 aa12.33□□□□□ -0.43
SNX6-201ENST00000362031 CIZ1Q9ULV3 898 aaPredicted RBP12.33□□□□□ -0.43
SNX6-201ENST00000362031 GCOM1H8Y6P7 765 aaPredicted RBP12.33□□□□□ -0.44
SNX6-201ENST00000362031 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 POLR2MP0CAP2 368 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 CALML3P27482 149 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 GNA11P29992 359 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 MRPL12P52815 198 aaKnown RBP12.33□□□□□ -0.44
SNX6-201ENST00000362031 GHRHRQ02643 423 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 WDR78Q5VTH9 848 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 TNPO1Q92973 898 aaKnown RBP12.33□□□□□ -0.44
SNX6-201ENST00000362031 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
SNX6-201ENST00000362031 NUCB2P80303 420 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 INF2Q27J81 1249 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 IL31RAQ8NI17 732 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 GTF3C2Q8WUA4 911 aaPredicted RBP12.32□□□□□ -0.44
SNX6-201ENST00000362031 FGD4Q96M96 766 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 SLC25A27O95847 323 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 ATP2B1P20020 1258 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX6-201ENST00000362031 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 GALNT17Q6IS24 598 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 CRYGNQ8WXF5 182 aa12.32□□□□□ -0.44
SNX6-201ENST00000362031 ZNFX1Q9P2E3 1918 aaKnown RBP12.31□□□□□ -0.44
SNX6-201ENST00000362031 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 COBLO75128 1261 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 ALDH1A1P00352 501 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
SNX6-201ENST00000362031 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
SNX6-201ENST00000362031 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 SHCBP1Q8NEM2 672 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 TFIP11Q9UBB9 837 aaKnown RBP12.31□□□□□ -0.44
SNX6-201ENST00000362031 MRVI1Q9Y6F6 885 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 TCHHQ07283 1943 aa12.31□□□□□ -0.44
SNX6-201ENST00000362031 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 GNL2Q13823 731 aaKnown RBP12.3□□□□□ -0.44
SNX6-201ENST00000362031 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 REM2Q8IYK8 340 aaPredicted RBP12.3□□□□□ -0.44
SNX6-201ENST00000362031 MROH8Q9H579 483 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 PCDHB6Q9Y5E3 794 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
SNX6-201ENST00000362031 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 EIF2AK2P19525 551 aaKnown RBP12.3□□□□□ -0.44
SNX6-201ENST00000362031 ADORA2AP29274 412 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
SNX6-201ENST00000362031 TRAF1Q13077 416 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX6-201ENST00000362031 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 BICD2Q8TD16 824 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 UIMC1Q96RL1 719 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 MMP19Q99542 508 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 CLIC4Q9Y696 253 aa12.3□□□□□ -0.44
SNX6-201ENST00000362031 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
SNX6-201ENST00000362031 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
SNX6-201ENST00000362031 CCNA1P78396 465 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms