RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 FBXL7Q9UJT9 491 aa6.76□□□□□ -1.33
RPL39-201ENST00000361575 PLAGL2Q9UPG8 496 aa6.76□□□□□ -1.33
RPL39-201ENST00000361575 RAXQ9Y2V3 346 aa6.76□□□□□ -1.33
RPL39-201ENST00000361575 C1QTNF9BB2RNN3 333 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 CBX4O00257 560 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 TRAF5O00463 557 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 DSG1Q02413 1049 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 MCL1Q07820 350 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 CCDC181Q5TID7 509 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 MTDHQ86UE4 582 aaKnown RBP6.75□□□□□ -1.33
RPL39-201ENST00000361575 IFNL3Q8IZI9 196 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 FBXL6Q8N531 539 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 IGSF22Q8N9C0 903 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 LINC00116Q8NCU8 138 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 COG1Q8WTW3 980 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 CCDC8Q9H0W5 538 aaPredicted RBP6.75□□□□□ -1.33
RPL39-201ENST00000361575 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 COQ6Q9Y2Z9 468 aa6.75□□□□□ -1.33
RPL39-201ENST00000361575 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 GNAT3A8MTJ3 354 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 B4E1Z4 1266 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 M0R2C6 588 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 FGF10O15520 208 aaPredicted RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 SYPP08247 313 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 GSTM1P09488 218 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 ADCYAP1R1P41586 468 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 SEPHS1P49903 392 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 NFE2Q16621 373 aaPredicted RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 CYP27C1Q4G0S4 372 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 CDKAL1Q5VV42 579 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 RNF219Q5W0B1 726 aaPredicted RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 NXPE1Q8N323 547 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 PI4K2BQ8TCG2 481 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 TSR2Q969E8 191 aaKnown RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 WNK4Q96J92 1243 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 FOXP3Q9BZS1 431 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 STOML1Q9UBI4 398 aa6.74□□□□□ -1.33
RPL39-201ENST00000361575 PPARGC1AQ9UBK2 798 aaKnown RBP6.74□□□□□ -1.33
RPL39-201ENST00000361575 FAM155AB1AL88 458 aaPredicted RBP6.73□□□□□ -1.33
RPL39-201ENST00000361575 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 WNT9AO14904 365 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 BRINP1O60477 761 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 F2P00734 622 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 CPEP16870 476 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.337e-18■■□□□ 11.5
RPL39-201ENST00000361575 FLT3P36888 993 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 NOP2P46087 812 aaKnown RBP6.73□□□□□ -1.33
RPL39-201ENST00000361575 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 KCNAB2Q13303 367 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 LRRC41Q15345 812 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 RNF43Q68DV7 783 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 ZPBP2Q6X784 338 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 UBE2R2Q712K3 238 aaPredicted RBP6.73□□□□□ -1.33
RPL39-201ENST00000361575 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
RPL39-201ENST00000361575 KIF18BQ86Y91 864 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 SMC1BQ8NDV3 1235 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 DIO2Q92813 273 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 HSPA12BQ96MM6 686 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 MMP19Q99542 508 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 TTC1Q99614 292 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 IFT22Q9H7X7 185 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 SEMA3GQ9NS98 782 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 GPATCH2Q9NW75 528 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 TCFL5Q9UL49 500 aa6.73□□□□□ -1.33
RPL39-201ENST00000361575 H3BS24 57 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 SRGAP2CP0DJJ0 459 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 TPP2P29144 1249 aaPredicted RBP6.72□□□□□ -1.33
RPL39-201ENST00000361575 TMEM177Q53S58 311 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 CREB3L3Q68CJ9 461 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 OVCH1Q7RTY7 1134 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
RPL39-201ENST00000361575 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 TP53INP1Q96A56 240 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 MTMR8Q96EF0 704 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 DCAF5Q96JK2 942 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 PTCHD1Q96NR3 888 aa6.72□□□□□ -1.33
RPL39-201ENST00000361575 CELF4Q9BZC1 486 aaKnown RBP6.72□□□□□ -1.33
RPL39-201ENST00000361575 GABRDO14764 452 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 ZEB2O60315 1214 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 FKTNO75072 461 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 CEACAM5P06731 702 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 NEK2P51955 445 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 EPHB1P54762 984 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 PCBP3P57721 371 aaKnown RBP6.71□□□□□ -1.34
RPL39-201ENST00000361575 PAK1Q13153 545 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 HSP90AB2PQ58FF8 381 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 ZC3H7AQ8IWR0 971 aaKnown RBP6.71□□□□□ -1.34
RPL39-201ENST00000361575 CNTD1Q8N815 330 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 TMEM52Q8NDY8 209 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 USP7Q93009 1102 aa6.71□□□□□ -1.34
RPL39-201ENST00000361575 UBE2FQ969M7 185 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms