RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 OXCT2Q9BYC2 517 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-202ENST00000360642 PDCL3Q9H2J4 239 aa8.43□□□□□ -1.06
CLCN3-202ENST00000360642 TNKS2Q9H2K2 1166 aa8.43□□□□□ -1.06
CLCN3-202ENST00000360642 DENND2AQ9ULE3 1009 aa8.43□□□□□ -1.06
CLCN3-202ENST00000360642 MYO5AQ9Y4I1 1855 aaKnown RBP8.43□□□□□ -1.06
CLCN3-202ENST00000360642 MROH5Q6ZUA9 1318 aa8.43□□□□□ -1.06
CLCN3-202ENST00000360642 UQCRFS1P1P0C7P4 283 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 PTGS1P23219 599 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ME1P48163 572 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 PUM3Q15397 648 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 STX1AQ16623 288 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 OTUD7BQ6GQQ9 843 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 CCDC73Q6ZRK6 1079 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 C11orf57Q6ZUT1 292 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 BRAPQ7Z569 592 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 RPUSD2Q8IZ73 545 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 LPIN2Q92539 896 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ORC3Q9UBD5 711 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 SALL4Q9UJQ4 1053 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ZMYM6O95789 1325 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ZNF532Q9HCE3 1301 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 WNK3Q9BYP7 1800 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 EXOC5O00471 708 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 YEATS4O95619 227 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 PDE6AP16499 860 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ALX1Q15699 326 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 COL13A1Q5TAT6 717 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 CYB5R4Q7L1T6 521 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 FSIP1Q8NA03 581 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 STRBPQ96SI9 672 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ANGEL1Q9UNK9 670 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 LEMD3Q9Y2U8 911 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 CLIC4Q9Y696 253 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 COL16A1Q07092 1604 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 SH2B2O14492 632 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 KINO60870 393 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 EIF5P55010 431 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 CCDC186Q7Z3E2 898 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 CERS3Q8IU89 383 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 MRPS27Q92552 414 aaKnown RBP8.42□□□□□ -1.06
CLCN3-202ENST00000360642 TRIM5Q9C035 493 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 ABCB6Q9NP58 842 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 GABBR1Q9UBS5 961 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 NEDD4P46934 1319 aa8.42□□□□□ -1.06
CLCN3-202ENST00000360642 DOCK2Q92608 1830 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 KIF28PB7ZC32 967 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 KIF23Q02241 960 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 DNTTIP2Q5QJE6 756 aaKnown RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 INTS5Q6P9B9 1019 aaKnown RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 DHX40Q8IX18 779 aaKnown RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 IGDCC4Q8TDY8 1250 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 NRBP1Q9UHY1 535 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 COL22A1Q8NFW1 1626 aaPredicted RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 IDH1O75874 414 aaKnown RBP8.41□□□□□ -1.06
CLCN3-202ENST00000360642 ARSDP51689 593 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 IGBP1P78318 339 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 TRDNQ13061 729 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 PPP2R5EQ16537 467 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 GJB4Q9NTQ9 266 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 PCDHB5Q9Y5E4 795 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 CPLX1O14810 134 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 NDUFA8P51970 172 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 SUSD4Q5VX71 490 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 RAB11FIP4Q86YS3 637 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 SPATA5Q8NB90 893 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 HPS1Q92902 700 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 ANO10Q9NW15 660 aa8.41□□□□□ -1.06
CLCN3-202ENST00000360642 RREB1Q92766 1687 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 A0A1B0GVL5 298 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 SPTLC2O15270 562 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-202ENST00000360642 NTRK3Q16288 839 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 AXDND1Q5T1B0 1012 aaPredicted RBP8.4□□□□□ -1.06
CLCN3-202ENST00000360642 APOA5Q6Q788 366 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 SGMS1Q86VZ5 419 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 RAVER1Q8IY67 606 aaKnown RBP8.4□□□□□ -1.06
CLCN3-202ENST00000360642 ASAP3Q8TDY4 903 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
CLCN3-202ENST00000360642 A0A1W2PP55 124 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 MMP20O60882 483 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 CDC27P30260 824 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.07
CLCN3-202ENST00000360642 RASGRF1Q13972 1273 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 RAB33AQ14088 237 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 GNASQ5JWF2 1037 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 ANO1Q5XXA6 986 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 GK5Q6ZS86 529 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.07
CLCN3-202ENST00000360642 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms