RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 ARFGEF1Q9Y6D6 1849 aa14.3□□□□□ -0.12
GGPS1-202ENST00000358966 TECP42680 631 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 ARHGAP27Q6ZUM4 889 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 BMP3P12645 472 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 KRT25Q7Z3Z0 450 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
GGPS1-202ENST00000358966 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
GGPS1-202ENST00000358966 NEMFO60524 1076 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 HOXA13P31271 388 aaPredicted RBP14.28□□□□□ -0.12
GGPS1-202ENST00000358966 TXKP42681 527 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 TNIP1Q15025 636 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 DTHD1Q6ZMT9 781 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 TEPSINQ96N21 525 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
GGPS1-202ENST00000358966 NCAPHQ15003 741 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 E2F4Q16254 413 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 NBPF12Q5TAG4 269 aaPredicted RBP14.28□□□□□ -0.12
GGPS1-202ENST00000358966 CCDC174Q6PII3 467 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 DRC7Q8IY82 874 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 POTEMA6NI47 508 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 FZD9O00144 591 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 BMP15O95972 392 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 CAP2P40123 477 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 ZNF75DP51815 510 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 CUL4BQ13620 913 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 NOLC1Q14978 699 aaKnown RBP eCLIP14.28□□□□□ -0.12
GGPS1-202ENST00000358966 SYDE2Q5VT97 1194 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 MTMR14Q8NCE2 650 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 HSD3B7Q9H2F3 369 aa14.28□□□□□ -0.12
GGPS1-202ENST00000358966 PTGS1P23219 599 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 INPP5BP32019 993 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 PRKG1Q13976 671 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.12
GGPS1-202ENST00000358966 ARID5BQ14865 1188 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 KIF4BQ2VIQ3 1234 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 TBC1D5Q92609 795 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 CUL5Q93034 780 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 SMARCE1Q969G3 411 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 DEFB129Q9H1M3 183 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 RIC8AQ9NPQ8 531 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 PRR12Q9ULL5 1215 aa14.27□□□□□ -0.12
GGPS1-202ENST00000358966 ESYT2A0FGR8 921 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 OR52Z1P0C646 297 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
GGPS1-202ENST00000358966 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 FAM83AQ86UY5 434 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 BANK1Q8NDB2 785 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 ZNF341Q9BYN7 854 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 TMX1Q9H3N1 280 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 RSPH14Q9UHP6 348 aa14.27□□□□□ -0.13
GGPS1-202ENST00000358966 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
GGPS1-202ENST00000358966 PDXDC2PQ6P474 469 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 SLC30A10Q6XR72 485 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 GMCL1Q96IK5 515 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 MED15Q96RN5 788 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 KCNF1Q9H3M0 494 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 MAPK8IP1Q9UQF2 711 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 COL2A1P02458 1487 aaPredicted RBP14.26□□□□□ -0.13
GGPS1-202ENST00000358966 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 OPLAHO14841 1288 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
GGPS1-202ENST00000358966 EPS15P42566 896 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 STX17P56962 302 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 LRMPQ12912 555 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 NAT10Q9H0A0 1025 aaKnown RBP14.26□□□□□ -0.13
GGPS1-202ENST00000358966 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
GGPS1-202ENST00000358966 MEIS2O14770 477 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 STAT6P42226 847 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 CLK2P49760 499 aaKnown RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 STAT2P52630 851 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 ARL6IP4Q66PJ3 421 aaKnown RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 NUDT12Q9BQG2 462 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 POLR2AP24928 1970 aaKnown RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 UBA7P41226 1012 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 GTF2A1P52655 376 aaPredicted RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 UBXN2AP68543 259 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 DPYDQ12882 1025 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 CCDC186Q7Z3E2 898 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 ZKSCAN4Q969J2 545 aaPredicted RBP14.25□□□□□ -0.13
GGPS1-202ENST00000358966 DISC1Q9NRI5 854 aa14.25□□□□□ -0.13
GGPS1-202ENST00000358966 LONP1P36776 959 aaKnown RBP14.24□□□□□ -0.13
GGPS1-202ENST00000358966 CALCRLQ16602 461 aa14.24□□□□□ -0.13
GGPS1-202ENST00000358966 SH3RF1Q7Z6J0 888 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms