RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FRMPD2Q68DX3 1309 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-203ENST00000358528 BACH1O14867 736 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 KRT14P02533 472 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 OR52Z1P0C646 297 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CCNE1P24864 410 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 MECOMQ03112 1051 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 TROAPQ12815 778 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 NNTQ13423 1086 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CFAP221Q4G0U5 840 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 DCAF17Q5H9S7 520 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 USP17L2Q6R6M4 530 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CCNI2Q6ZMN8 369 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 NBPF5PQ86XG9 351 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 IFT20Q8IY31 132 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 ADSSL1Q8N142 457 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CAPN11Q9UMQ6 739 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 KDM3BQ7LBC6 1761 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 LRRC53A6NM62 1247 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 PDE2AO00408 941 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 KCNK3O14649 394 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 DIXDC1Q155Q3 683 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 NAA35Q5VZE5 725 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 TRAPPC11Q7Z392 1133 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 PACS2Q86VP3 889 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 EFCAB13Q8IY85 973 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 SPATA4Q8NEY3 305 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 GIMAP7Q8NHV1 300 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CCDC114Q96M63 670 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 SCLT1Q96NL6 688 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 LSM14BQ9BX40 385 aaKnown RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CAPN6Q9Y6Q1 641 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 SPATA31A3Q5VYP0 1347 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 HGSO14964 777 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CRKLP46109 303 aaKnown RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 KIAA0753Q2KHM9 967 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 ERFEQ4G0M1 354 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 SLC9C1Q4G0N8 1177 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CT47A1Q5JQC4 288 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 GPR101Q96P66 508 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 NDST4Q9H3R1 872 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 THAP9Q9H5L6 903 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 REXO2Q9Y3B8 237 aaKnown RBP7.28□□□□□ -1.24
CSDE1-203ENST00000358528 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 FAM205AQ6ZU69 1335 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 CDHR2Q9BYE9 1310 aa7.28□□□□□ -1.24
CSDE1-203ENST00000358528 A0A087WUV0 522 aaPredicted RBP7.27□□□□□ -1.24
CSDE1-203ENST00000358528 TCP1P17987 556 aaKnown RBP7.27□□□□□ -1.24
CSDE1-203ENST00000358528 IRAK1P51617 712 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 GUCY1A3Q02108 690 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 KLHL30Q0D2K2 578 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 IFT88Q13099 833 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 SEC23AQ15436 765 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 CALCRLQ16602 461 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 PDXDC2PQ6P474 469 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 MICALCLQ6ZW33 695 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 NLRP3Q96P20 1036 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 OSBPL9Q96SU4 736 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.24
CSDE1-203ENST00000358528 ADAMTS3O15072 1205 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 BAG3O95817 575 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 GNA11P29992 359 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 TRAPPC10P48553 1259 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 HERC4Q5GLZ8 1057 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 SFMBT2Q5VUG0 894 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 VGLL2Q8N8G2 317 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 UHMK1Q8TAS1 419 aaKnown RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 TBCKQ8TEA7 893 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 TBC1D5Q92609 795 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 ARL8AQ96BM9 186 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 COA7Q96BR5 231 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 DHTKD1Q96HY7 919 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 MTRQ99707 1265 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 DCP1AQ9NPI6 582 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 ADAMTS1Q9UHI8 967 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 RIC1Q4ADV7 1423 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 ZSCAN5CA6NGD5 496 aaPredicted RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 POTEMA6NI47 508 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 GOLGA8KD6RF30 607 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 PSMD14O00487 310 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 SYF2O95926 243 aaKnown RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 EPHB4P54760 987 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 APBA1Q02410 837 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 PAK2Q13177 524 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 IL17AQ16552 155 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CCDC121Q6ZUS5 278 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 APTXQ7Z2E3 356 aaKnown RBP7.27□□□□□ -1.25
CSDE1-203ENST00000358528 DNAAF5Q86Y56 855 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 GJA10Q969M2 543 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 CEP89Q96ST8 783 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 SELENOSQ9BQE4 189 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 DPH5Q9H2P9 285 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 GOLPH3Q9H4A6 298 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 EFCC1Q9HA90 598 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 STIM2Q9P246 746 aa7.27□□□□□ -1.25
CSDE1-203ENST00000358528 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms