RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
CNOT3-202ENST00000358389 MAGOHBQ96A72 148 aaKnown RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
CNOT3-202ENST00000358389 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 IFNAR1P17181 557 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 KIF11P52732 1056 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF790Q6PG37 636 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 MKNK2Q9HBH9 465 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-202ENST00000358389 UPP2O95045 317 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 TNNC1P63316 161 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 NTRK3Q16288 839 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 NBPF9Q3BBW0 867 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF658Q5TYW1 1059 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-202ENST00000358389 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-202ENST00000358389 KCNV2Q8TDN2 545 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 DYDC1Q8WWB3 177 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
CNOT3-202ENST00000358389 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 FAM228AQ86W67 206 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF496Q96IT1 587 aaPredicted RBP12.62□□□□□ -0.39
CNOT3-202ENST00000358389 DNAJC7Q99615 494 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 CPDO75976 1380 aa12.62□□□□□ -0.39
CNOT3-202ENST00000358389 IFNAR2P48551 515 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 NLRP5P59047 1200 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 CAVIN3Q969G5 261 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 SNX1Q13596 522 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 THEMIS2Q5TEJ8 643 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 TRMT1LQ7Z2T5 733 aaKnown RBP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 CD2APQ9Y5K6 639 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 MLH3Q9UHC1 1453 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 GCP02774 474 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 UBA7P41226 1012 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 MAEAQ7L5Y9 396 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 IQCKQ8N0W5 287 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 CASKIN2Q8WXE0 1202 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 NOP53Q9NZM5 478 aaKnown RBP12.61□□□□□ -0.39
CNOT3-202ENST00000358389 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
CNOT3-202ENST00000358389 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 RAPGEF5Q92565 580 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 XDHP47989 1333 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 CEP104O60308 925 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 SMIM24O75264 130 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 RBM5P52756 815 aaKnown RBP eCLIP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FBXL16Q8N461 479 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 ELAC2Q9BQ52 826 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FAM170AA1A519 330 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 TRIM37O94972 964 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FECHP22830 423 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 KIF5BP33176 963 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 PSMD2Q13200 908 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 ITGB3BPQ13352 177 aaPredicted RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 PDIA6Q15084 440 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 UHMK1Q8TAS1 419 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 IGDCC4Q8TDY8 1250 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 IP6K1Q92551 441 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 TBX22Q9Y458 520 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 FAM208AQ9UK61 1670 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 LRRC10BA6NIK2 292 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 EEF1GP26641 437 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 PMS1P54277 932 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 RCSD1Q6JBY9 416 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
CNOT3-202ENST00000358389 LUC7LQ9NQ29 371 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 SEPT11Q9NVA2 429 aaKnown RBP12.6□□□□□ -0.39
CNOT3-202ENST00000358389 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 MYH8P13535 1937 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 KCNK3O14649 394 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 BMP15O95972 392 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 PCK1P35558 622 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 SLC8A3P57103 927 aa12.59□□□□□ -0.39
CNOT3-202ENST00000358389 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms