RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
SMARCAL1-201ENST00000357276 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
SMARCAL1-201ENST00000357276 CD248Q9HCU0 757 aa13.46□□□□□ -0.25
SMARCAL1-201ENST00000357276 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.25
SMARCAL1-201ENST00000357276 KBTBD4Q9NVX7 518 aa13.46□□□□□ -0.25
SMARCAL1-201ENST00000357276 ITGB4P16144 1822 aa13.46□□□□□ -0.26
SMARCAL1-201ENST00000357276 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.26
SMARCAL1-201ENST00000357276 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 MDH1P40925 334 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 MAGEC3Q8TD91 643 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 MOCS3O95396 460 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 GLI1P08151 1106 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 FAM153BP0C7A2 387 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 NR1D1P20393 614 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 ATP1A2P50993 1020 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 NEDD9Q14511 834 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 FAM153CQ494X1 144 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 RNF14Q9UBS8 474 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 FAM153AQ9UHL3 310 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 SLIT2O94813 1529 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 PSMA7O14818 248 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 TDO2P48775 406 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 CTSWP56202 376 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 EVA1CP58658 441 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 SPA17Q15506 151 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 KCTD16Q68DU8 428 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 C8orf74Q6P047 294 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 LPIN2Q92539 896 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 ATP6V1G3Q96LB4 118 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC42Q96M95 316 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 SALL4Q9UJQ4 1053 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
SMARCAL1-201ENST00000357276 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CLGNO14967 610 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC96Q2M329 555 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 SMARCAL1Q9NZC9 954 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 EHD2Q9NZN4 543 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 HMGB1P1B2RPK0 211 aaPredicted RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 ADAMTS3O15072 1205 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 FGRP09769 529 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 STAT6P42226 847 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CARSP49589 748 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 PUM3Q15397 648 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CNNM1Q9NRU3 951 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 SIK3Q9Y2K2 1263 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 H0YHG0 523 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 MYBP10242 640 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CCNE1P24864 410 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 KIF11P52732 1056 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 CFAP58Q5T655 872 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 LRRC15Q8TF66 581 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 ESR2Q92731 530 aa13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-201ENST00000357276 MRPL12P52815 198 aaKnown RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 EIF1ADQ8N9N8 165 aaKnown RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CNOT6LQ96LI5 555 aaKnown RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 ALS2CR12Q96Q35 445 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 SLC40A1Q9NP59 571 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CICQ96RK0 1608 aaPredicted RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 NKRFO15226 690 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CALM1P0DP23 149 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CALM2P0DP24 149 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 CALM3P0DP25 149 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 ELF1P32519 619 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 MCM7P33993 719 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 PAK2Q13177 524 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 RNF10Q8N5U6 811 aaKnown RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 P2RX5Q93086 422 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 ACTR5Q9H9F9 607 aaPredicted RBP13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 NFU1Q9UMS0 254 aa13.43□□□□□ -0.26
SMARCAL1-201ENST00000357276 BHMG1C9JSJ3 638 aaPredicted RBP13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
SMARCAL1-201ENST00000357276 DDAH1O94760 285 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms