RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 WWC2Q6AWC2 1192 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 MCTP2Q6DN12 878 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 ZNF467Q7Z7K2 595 aaPredicted RBP18.41■□□□□ 0.54
FDPS-201ENST00000356657 DPP9Q86TI2 863 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 MSL3Q8N5Y2 521 aaKnown RBP18.41■□□□□ 0.54
FDPS-201ENST00000356657 SMARCC2Q8TAQ2 1214 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 PIBF1Q8WXW3 757 aa18.41■□□□□ 0.54
FDPS-201ENST00000356657 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
FDPS-201ENST00000356657 ORC3Q9UBD5 711 aaPredicted RBP18.41■□□□□ 0.54
FDPS-201ENST00000356657 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
FDPS-201ENST00000356657 STXBP3O00186 592 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 NFIBO00712 420 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 CTDNEP1O95476 244 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 GNA11P29992 359 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 FLT3LGP49771 235 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 HSD17B4P51659 736 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 PRKCZQ05513 592 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 GALNT17Q6IS24 598 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 NSMFQ6X4W1 530 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 DNERQ8NFT8 737 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 PXYLP1Q8TE99 480 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 CUL5Q93034 780 aa18.4■□□□□ 0.54
FDPS-201ENST00000356657 INTS4Q96HW7 963 aaKnown RBP18.4■□□□□ 0.54
FDPS-201ENST00000356657 B4DLN1 442 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 POTEB2H3BUK9 544 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 GCOM1H8Y6P7 765 aaPredicted RBP18.39■□□□□ 0.54
FDPS-201ENST00000356657 POLR2MP0CAP2 368 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.54
FDPS-201ENST00000356657 ST3GAL1Q11201 340 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 CUL4AQ13619 759 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 RAET1EQ8TD07 263 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.54
FDPS-201ENST00000356657 hCG_1642624A0A1W2PR95 340 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 CALML3P27482 149 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 RPS6P62753 249 aaKnown RBP18.39■□□□□ 0.53
FDPS-201ENST00000356657 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 FBXO46Q6PJ61 603 aaPredicted RBP18.39■□□□□ 0.53
FDPS-201ENST00000356657 FAM133AQ8N9E0 248 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 SLAIN1Q8ND83 568 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.533e-6■□□□□ 10.1
FDPS-201ENST00000356657 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 PTPN22Q9Y2R2 807 aa18.39■□□□□ 0.53
FDPS-201ENST00000356657 LCTP09848 1927 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 OPLAHO14841 1288 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 CFBP00751 764 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 ADCY7P51828 1080 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 ZNF792Q3KQV3 632 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
FDPS-201ENST00000356657 FOSP01100 380 aaPredicted RBP18.37■□□□□ 0.53
FDPS-201ENST00000356657 CAP1Q01518 475 aa18.37■□□□□ 0.53
FDPS-201ENST00000356657 BAATQ14032 418 aaPredicted RBP18.37■□□□□ 0.53
FDPS-201ENST00000356657 BECN1Q14457 450 aa18.37■□□□□ 0.53
FDPS-201ENST00000356657 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
FDPS-201ENST00000356657 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
FDPS-201ENST00000356657 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
FDPS-201ENST00000356657 SMCO2A6NFE2 343 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 ASB14A6NK59 587 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 FDPSP14324 419 aaKnown RBP18.36■□□□□ 0.53
FDPS-201ENST00000356657 AP3B2Q13367 1082 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 TRIM29Q14134 588 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 MAMDC4Q6UXC1 1216 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 SYTL5Q8TDW5 730 aaPredicted RBP18.36■□□□□ 0.53
FDPS-201ENST00000356657 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 EHMT1Q9H9B1 1298 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 NRBP1Q9UHY1 535 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 GABRQQ9UN88 632 aa18.36■□□□□ 0.53
FDPS-201ENST00000356657 JAK2O60674 1132 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 COBLO75128 1261 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 PGK2P07205 417 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 CYP2B6P20813 491 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 TYW1BQ6NUM6 668 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 DAGLBQ8NCG7 672 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 NSUN6Q8TEA1 469 aaKnown RBP18.35■□□□□ 0.53
FDPS-201ENST00000356657 IWS1Q96ST2 819 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 BRMS1Q9HCU9 246 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 SMC3Q9UQE7 1217 aa18.35■□□□□ 0.53
FDPS-201ENST00000356657 SPDYE3A6NKU9 549 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 MEIS2O14770 477 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 ADCY3O60266 1144 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 HMGCRP04035 888 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
FDPS-201ENST00000356657 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
FDPS-201ENST00000356657 REXO1Q8N1G1 1221 aaKnown RBP18.34■□□□□ 0.53
FDPS-201ENST00000356657 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 FRMPD4Q14CM0 1322 aa18.34■□□□□ 0.53
FDPS-201ENST00000356657 PDCP20941 246 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 GRK4P32298 578 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 NLRP5P59047 1200 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 MFSD14CQ5VZR4 134 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 MORC4Q8TE76 937 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 RMDN3Q96TC7 470 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 TINF2Q9BSI4 451 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 PTCH2Q9Y6C5 1203 aa18.33■□□□□ 0.53
FDPS-201ENST00000356657 HTTP42858 3142 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms