RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PDE4DQ08499 809 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 PPIGQ13427 754 aaKnown RBP eCLIP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 PWP2Q15269 919 aaKnown RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 IMMTQ16891 758 aaKnown RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 CXCL17Q6UXB2 119 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 DGKHQ86XP1 1220 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 FBXO16Q8IX29 292 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 EXOC6Q8TAG9 804 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 ZKSCAN3Q9BRR0 538 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 PDGFCQ9NRA1 345 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 GNEQ9Y223 722 aaKnown RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 NFIBO00712 420 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 ALDH5A1P51649 535 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-204ENST00000356316 EPHB4P54760 987 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-204ENST00000356316 TAPT1Q6NXT6 567 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 TBC1D10CQ8IV04 446 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 FAM126BQ8IXS8 530 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
CAPN3-204ENST00000356316 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 PPP1R12CQ9BZL4 782 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 TBX21Q9UL17 535 aa12.49□□□□□ -0.41
CAPN3-204ENST00000356316 CTAGE5O15320 804 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
CAPN3-204ENST00000356316 KDM4AO75164 1064 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 GOLGA8HP0CJ92 632 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 CPT1AP50416 773 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 USH1GQ495M9 461 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 DUSP28Q4G0W2 176 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 MORC4Q8TE76 937 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-204ENST00000356316 CDX2Q99626 313 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-204ENST00000356316 KRT23Q9C075 422 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 DDX49Q9Y6V7 483 aaKnown RBP12.48□□□□□ -0.41
CAPN3-204ENST00000356316 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
CAPN3-204ENST00000356316 ASTN1O14525 1302 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 NEDD4P46934 1319 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 RAD50Q92878 1312 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 TMEM265A0A087WTH1 108 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 B4E1Z4 1266 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 CSF2RAP15509 400 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 RPS6P62753 249 aaKnown RBP12.47□□□□□ -0.41
CAPN3-204ENST00000356316 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 CLEC4DQ8WXI8 215 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN3-204ENST00000356316 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 MTIF3Q9H2K0 278 aaKnown RBP12.47□□□□□ -0.41
CAPN3-204ENST00000356316 HIPK3Q9H422 1215 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 ZSWIM5Q9P217 1185 aa12.47□□□□□ -0.41
CAPN3-204ENST00000356316 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 KPNA6O60684 536 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 CD4P01730 458 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 MYL3P08590 195 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 PARP1P09874 1014 aaKnown RBP12.46□□□□□ -0.41
CAPN3-204ENST00000356316 SUPT20HL2P0C7V6 817 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 CYP2C18P33260 490 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-204ENST00000356316 ASPRV1Q53RT3 343 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 PSRC1Q6PGN9 363 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-204ENST00000356316 SLC30A10Q6XR72 485 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 RPUSD2Q8IZ73 545 aaKnown RBP12.46□□□□□ -0.41
CAPN3-204ENST00000356316 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 SLC43A3Q8NBI5 491 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 OR6J1Q8NGC5 347 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 MAF1Q9H063 256 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
CAPN3-204ENST00000356316 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-204ENST00000356316 ABCB11O95342 1321 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 FGBP02675 491 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 ACRP10323 421 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 FOSL2P15408 326 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 PSMC6P62333 389 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 TRDNQ13061 729 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 TMEM240Q5SV17 173 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 TMEM63BQ5T3F8 832 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.45□□□□□ -0.42
CAPN3-204ENST00000356316 ADGRF4Q8IZF3 695 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
CAPN3-204ENST00000356316 MYLIPQ8WY64 445 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms