RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FBXL5Q9UKA1 691 aa18.77■□□□□ 0.59
COL27A1-201ENST00000356083 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 EEF1DP29692 281 aaKnown RBP18.76■□□□□ 0.59
COL27A1-201ENST00000356083 LRRC4Q9HBW1 653 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 GOLGA8SH3BPF8 625 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 HIP1RO75146 1068 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 ELF2Q15723 593 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 DCAF15Q66K64 600 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 TRIM67Q6ZTA4 783 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 GRK7Q8WTQ7 553 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 CPP00450 1065 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 SRGAP2CP0DJJ0 459 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 ABTB1Q969K4 478 aaPredicted RBP18.76■□□□□ 0.59
COL27A1-201ENST00000356083 ZFYVE19Q96K21 471 aa18.76■□□□□ 0.59
COL27A1-201ENST00000356083 NOS1P29475 1434 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 WDR64B1ANS9 1081 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TOM1L1O75674 476 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 KRT10P13645 584 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 PNOCQ13519 176 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 GOLGA5Q8TBA6 731 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 MAP10Q9P2G4 905 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 KCTD6Q8NC69 237 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 CALN1Q9BXU9 219 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 A1BGP04217 495 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TUBBP07437 444 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 RPS6KB1P23443 525 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 KRT25Q7Z3Z0 450 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TAGAPQ8N103 731 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 IWS1Q96ST2 819 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TYW1Q9NV66 732 aaKnown RBP18.75■□□□□ 0.59
COL27A1-201ENST00000356083 COBLO75128 1261 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 CDO1Q16878 200 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TEKT4Q8WW24 435 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TBK1Q9UHD2 729 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 CFLARO15519 480 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 LRRN2O75325 713 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 GCKP35557 465 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 FAM160B1Q5W0V3 765 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 TMEM87BQ96K49 555 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 ZNF532Q9HCE3 1301 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 MTMR3Q13615 1198 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 POLR3EQ9NVU0 708 aa18.75■□□□□ 0.59
COL27A1-201ENST00000356083 MYL1P05976 194 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 IFNAR2P48551 515 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 DCAF4L1Q3SXM0 396 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 FAM173BQ6P4H8 233 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 DIS3L2Q8IYB7 885 aaKnown RBP18.74■□□□□ 0.59
COL27A1-201ENST00000356083 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.74■□□□□ 0.59
COL27A1-201ENST00000356083 ATG3Q9NT62 314 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 GOLGA8HP0CJ92 632 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 LIG3P49916 1009 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 SDR42E1Q8WUS8 393 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 DNAJC7Q99615 494 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 KRT80Q6KB66 452 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 HSPD1P10809 573 aaKnown RBP18.74■□□□□ 0.59
COL27A1-201ENST00000356083 ELMOD1Q8N336 334 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 FLOT2Q14254 428 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 DAPK1P53355 1430 aa18.74■□□□□ 0.59
COL27A1-201ENST00000356083 EFCAB13Q8IY85 973 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 RAPGEF5Q92565 580 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 HPS4Q9NQG7 708 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 NLRP4Q96MN2 994 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 ZCWPW1Q9H0M4 648 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 SH3TC1Q8TE82 1336 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 OSBPP22059 807 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 POLR2FP61218 127 aaKnown RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 TMED1Q13445 227 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 SPOPLQ6IQ16 392 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 HNRNPDLO14979 420 aaKnown RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 SRPK1Q96SB4 655 aaKnown RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 MRPL11Q9Y3B7 192 aaKnown RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 CAPN7Q9Y6W3 813 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 RECQLP46063 649 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 FBXO11Q86XK2 927 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 DEPDC1BQ8WUY9 529 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 GJA10Q969M2 543 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 NCLNQ969V3 563 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 GNA14O95837 355 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 KCNQ4P56696 695 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 NFX1Q12986 1120 aaKnown RBP18.73■□□□□ 0.59
COL27A1-201ENST00000356083 PCGF5Q86SE9 256 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 PGBD3Q8N328 593 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 RETREG2Q8NC44 543 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 RAD18Q9NS91 495 aa18.73■□□□□ 0.59
COL27A1-201ENST00000356083 XPOTO43592 962 aaKnown RBP18.72■□□□□ 0.59
COL27A1-201ENST00000356083 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-201ENST00000356083 ARHGAP25P42331 645 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 ELMSAN1Q6PJG2 1045 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 TLK1Q9UKI8 766 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 PPIP5K1Q6PFW1 1433 aa18.72■□□□□ 0.59
COL27A1-201ENST00000356083 MXD4Q14582 209 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms