RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ZNF830Q96NB3 372 aaPredicted RBP29.01■■■□□ 2.23
CLK2-201ENST00000355560 FEZ1Q99689 392 aa29.01■■■□□ 2.23
CLK2-201ENST00000355560 DDX25Q9UHL0 483 aaKnown RBP29.01■■■□□ 2.23
CLK2-201ENST00000355560 GTPBP6O43824 516 aaPredicted RBP29■■■□□ 2.23
CLK2-201ENST00000355560 LMOD1P29536 600 aaPredicted RBP29■■■□□ 2.23
CLK2-201ENST00000355560 ZNF341Q9BYN7 854 aa29■■■□□ 2.23
CLK2-201ENST00000355560 HSD3B7Q9H2F3 369 aa29■■■□□ 2.23
CLK2-201ENST00000355560 TTC12Q9H892 705 aaPredicted RBP29■■■□□ 2.23
CLK2-201ENST00000355560 DICER1Q9UPY3 1922 aaKnown RBP29■■■□□ 2.23
CLK2-201ENST00000355560 GCFC2P16383 781 aaKnown RBP29■■■□□ 2.23
CLK2-201ENST00000355560 CLCN1P35523 988 aa29■■■□□ 2.23
CLK2-201ENST00000355560 CHURC1Q8WUH1 139 aa29■■■□□ 2.23
CLK2-201ENST00000355560 PLIN2Q99541 437 aa29■■■□□ 2.23
CLK2-201ENST00000355560 LMNB1P20700 586 aa28.99■■■□□ 2.23
CLK2-201ENST00000355560 CUL4BQ13620 913 aa28.99■■■□□ 2.23
CLK2-201ENST00000355560 TMEM266Q2M3C6 531 aa28.99■■■□□ 2.23
CLK2-201ENST00000355560 KIFC2Q96AC6 838 aa28.99■■■□□ 2.23
CLK2-201ENST00000355560 FXR2P51116 673 aaKnown RBP eCLIP28.99■■■□□ 2.235e-9■□□□□ 10
CLK2-201ENST00000355560 NAP1L4Q99733 375 aaKnown RBP28.98■■■□□ 2.23
CLK2-201ENST00000355560 FHDC1Q9C0D6 1143 aaPredicted RBP28.98■■■□□ 2.23
CLK2-201ENST00000355560 TPM3P06753 285 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 PLCG1P19174 1290 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 FMR1Q06787 632 aaKnown RBP eCLIP28.97■■■□□ 2.23
CLK2-201ENST00000355560 NBPF12Q5TAG4 269 aaPredicted RBP28.97■■■□□ 2.23
CLK2-201ENST00000355560 GPRC5DQ9NZD1 345 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 SMCHD1A6NHR9 2005 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 OPLAHO14841 1288 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 CTNND1O60716 968 aaKnown RBP28.97■■■□□ 2.23
CLK2-201ENST00000355560 ANGEL2Q5VTE6 544 aaKnown RBP28.97■■■□□ 2.23
CLK2-201ENST00000355560 FAM160B2Q86V87 743 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 TRPM4Q8TD43 1214 aa28.97■■■□□ 2.23
CLK2-201ENST00000355560 RANBP17Q9H2T7 1088 aaKnown RBP28.97■■■□□ 2.23
CLK2-201ENST00000355560 PLA2G6O60733 806 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 ATP1A3P13637 1013 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 MCTP2Q6DN12 878 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 GPC2Q8N158 579 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 LRRC15Q8TF66 581 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 P2RX7Q99572 595 aaKnown RBP28.96■■■□□ 2.23
CLK2-201ENST00000355560 MMTAG2Q9BU76 263 aaKnown RBP28.96■■■□□ 2.23
CLK2-201ENST00000355560 RAB34Q9BZG1 259 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 LRWD1Q9UFC0 647 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 NRBP1Q9UHY1 535 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 USP11P51784 963 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 TRAF1Q13077 416 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 CCDC174Q6PII3 467 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 FEM1BQ9UK73 627 aa28.96■■■□□ 2.23
CLK2-201ENST00000355560 SPDYE3A6NKU9 549 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 PTGS1P23219 599 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 SAMD1Q6SPF0 538 aaPredicted RBP28.95■■■□□ 2.22
CLK2-201ENST00000355560 CCDC186Q7Z3E2 898 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 TRMT44Q8IYL2 757 aaKnown RBP28.95■■■□□ 2.22
CLK2-201ENST00000355560 CUEDC2Q9H467 287 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 FBXO28Q9NVF7 368 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 FANCLQ9NW38 375 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 IFNKQ9P0W0 207 aa28.95■■■□□ 2.22
CLK2-201ENST00000355560 POTEMA6NI47 508 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 APOBEC3FQ8IUX4 373 aaKnown RBP28.94■■■□□ 2.22
CLK2-201ENST00000355560 HAS1Q92839 578 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 GINM1Q9NU53 330 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 KBTBD4Q9NVX7 518 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 SBF1O95248 1867 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 ERCC5P28715 1186 aaPredicted RBP28.94■■■□□ 2.22
CLK2-201ENST00000355560 ARHGAP4P98171 946 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 SMYD4Q8IYR2 804 aaPredicted RBP28.94■■■□□ 2.22
CLK2-201ENST00000355560 ENOX1Q8TC92 643 aaKnown RBP28.94■■■□□ 2.22
CLK2-201ENST00000355560 CALML4Q96GE6 196 aa28.94■■■□□ 2.22
CLK2-201ENST00000355560 XPO4Q9C0E2 1151 aaKnown RBP28.94■■■□□ 2.22
CLK2-201ENST00000355560 FOSP01100 380 aaPredicted RBP28.93■■■□□ 2.22
CLK2-201ENST00000355560 RPN1P04843 607 aaKnown RBP28.93■■■□□ 2.22
CLK2-201ENST00000355560 HOXA13P31271 388 aaPredicted RBP28.93■■■□□ 2.22
CLK2-201ENST00000355560 INPP5BP32019 993 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 DCAF15Q66K64 600 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 CRYGNQ8WXF5 182 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 KCNF1Q9H3M0 494 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 MAGEF1Q9HAY2 307 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 NFE2L3Q9Y4A8 694 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 MARCH6O60337 910 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 CD44P16070 742 aaKnown RBP28.93■■■□□ 2.22
CLK2-201ENST00000355560 FANCCQ00597 558 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 PDIA5Q14554 519 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 CT47A1Q5JQC4 288 aaPredicted RBP28.93■■■□□ 2.22
CLK2-201ENST00000355560 RMND1Q9NWS8 449 aa28.93■■■□□ 2.22
CLK2-201ENST00000355560 MYL1P05976 194 aa28.92■■■□□ 2.22
CLK2-201ENST00000355560 MED15Q96RN5 788 aa28.92■■■□□ 2.22
CLK2-201ENST00000355560 KIAA1683Q9H0B3 1180 aa28.92■■■□□ 2.22
CLK2-201ENST00000355560 GGA3Q9NZ52 723 aa28.92■■■□□ 2.22
CLK2-201ENST00000355560 DOCK1Q14185 1865 aa28.92■■■□□ 2.22
CLK2-201ENST00000355560 PIK3CDO00329 1044 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 ZNF500O60304 480 aaPredicted RBP28.91■■■□□ 2.22
CLK2-201ENST00000355560 CCDC144BQ3MJ40 725 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 KLHL10Q6JEL2 608 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 MOXD1Q6UVY6 613 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 LPAR1Q92633 364 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 GJA10Q969M2 543 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 CYP3A7-CYP3A51PA0A087WV96 503 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 CYP3A7P24462 503 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 SREBF1P36956 1147 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 PRAMEF18Q5VWM3 479 aa28.91■■■□□ 2.22
CLK2-201ENST00000355560 WDR46O15213 610 aaKnown RBP28.9■■■□□ 2.22
CLK2-201ENST00000355560 EPS15P42566 896 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms